| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1582 |
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| Symbol | |
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| ID | 6163019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1681003 |
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| End bp | 1681980 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664336 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790614 |
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| Protein GI | 171058265 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.060873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCAG CGATTTCCTT CCAGCAGGTT CACAAGACCT TTGCCACCCC TCGCGGCGAA
CTGCGCGCCC TGACGGACGT GAGTTTCGAC ATCCGGCAAG GCGAGTTCTT CGGCCTGCTC
GGCCCCAACG GCGCGGGCAA GACCACCCTG ATCTCGATCC TGGCCGGCCT GGCGCGTGCC
ACCTCCGGCC GCGTCACGGT GATGGGCCAC GAGGTGGTGA GCGATTACGC CGCGGCCCGC
CAGTCGCTGG GCATCGTGCC GCAGGAGCTG GTGTTCGACC CCTTCTTCAG CGTGCGCGAA
TCGCTGCGCA TCCAGAGCGG CTATTTCGGC GTCAAGCACA ACGGCGCCTG GATCGACGAG
CTGCTCGAAG GCCTGGGCCT GGCCGACAAG GCCGGCGCCA ACATGCGCCA GCTGTCGGGC
GGCATGAAAC GCCGGGTGCT GGTGGCGCAG GCGCTGGTGC ACCGCCCGCC GGTGATCGTG
CTCGACGAGC CGACCGCGGG TGTGGACGTC GAGCTGCGTC AGACGCTGTG GCAGTTCATC
GCCCGGCTCA ACAAGCAGGG CTCGACCGTG CTGCTGACGA CCCACTACCT CGAAGAAGCC
GAGGCGCTGT GCGGCCGCAT CGCGATGCTC AAGCAGGGCC GGGTGGTCGC GCTCGACCGC
ACCAGCAACC TGCTGGCCGG CACCGCCAGC ACGATGCTGC GCTTCAAGAC CGACGACACG
CTGCCCGCCG ACCTGCTCGG CCAGTCGCGC GTGACCGGCC GCATCGCCCA GATCAAGGCG
CGTGACGCGA TCGAGGTCGA GGCTGTGCTG GCCCGCCTGC GCGCCGCCGG CGTGCGGGTC
GAGGATCTGG AAATCGGCCG CGCCGACCTC GAAGACGTGT TCCTCGAGAT CATGAACGGC
GCCGAGCCGC CGCACGTCAC GCAGCCGCCT CGGGCCGCCG ATCAGGCCGA GCCGACGCTG
GCGGAGGTGG CACGATGA
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| Protein sequence | MTPAISFQQV HKTFATPRGE LRALTDVSFD IRQGEFFGLL GPNGAGKTTL ISILAGLARA
TSGRVTVMGH EVVSDYAAAR QSLGIVPQEL VFDPFFSVRE SLRIQSGYFG VKHNGAWIDE
LLEGLGLADK AGANMRQLSG GMKRRVLVAQ ALVHRPPVIV LDEPTAGVDV ELRQTLWQFI
ARLNKQGSTV LLTTHYLEEA EALCGRIAML KQGRVVALDR TSNLLAGTAS TMLRFKTDDT
LPADLLGQSR VTGRIAQIKA RDAIEVEAVL ARLRAAGVRV EDLEIGRADL EDVFLEIMNG
AEPPHVTQPP RAADQAEPTL AEVAR
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