| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1577 |
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| Symbol | |
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| ID | 6163014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1676329 |
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| End bp | 1677399 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664331 |
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| Product | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase |
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| Protein accession | YP_001790609 |
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| Protein GI | 171058260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.224924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACCG CCTACACCGT CGCCGATTTC GATTTCGACC TGCCGCCCGA GCTGATCGCC
CAGCACCCGG CGCCCGAGCG CAGCGGCTCG CGCCTGCTCG ACGCCAGCGC GCCCGCTCAG
CCGGTCGACC GCATCTTCCA CGAGCTGCCC GGCCTGCTGA ATCCCGGCGA CCTGCTGGTC
TTCAACGACA CCCAGGTGAT CCGCGCCCGC CTGTTCGGCG CCAAGGACAG CGGCGGCGCG
GTCGAGGCGC TGGTCGAGCG CGTGCTACCG GCCGCGGCGG GCGGCGGGCA TGAAGTCTGG
GCCCATCTGC GCGCCAGCAA GTCGCCGCGT GCCGGCCAGT CGGTGCTGTT CCGCAACGAC
CAGGGCGAGC AGTTCAGCGC CGACGTGCTG GGCCGCTGCG GGCCGGAGGA TTCGCTGTTC
CACCTGCGTT TCCCGTCGGA TGCGTTCGCG CTGCTCGAAC GCTACGGCCA CGTGCCGCTG
CCGCCCTACA TCACGCATGC CGACGAGGCC GACGACGTGC GGCGCTACCA GACCGTGTTC
GCCCGCCACC CCGGCGCGGT GGCGGCGCCG ACCGCGGCGC TGCATTTCGA CGAGGCCTTG
CTGGCCGCGC TCGAAGCCCG CGGCGTGCGG CGCGCCAGCG TCACGCTGCA CGTGGGCGCC
GGCACCTTCC AGCCGGTGCG GGTGGACCGG CTCGACCAGC ACCGCATGCA CAGCGAGTGG
TTCGAGGTGC CGCAGGCCAC GGTCGATGCG ATCGCCGCCA CCCGTGCGGC CGGTGGCAAG
GTGGTCGCGG TGGGCACCAC CACGCTGCGC GCGCTCGAAT CGGCTGCCCG CGGCGGCGTG
CTGCGCGCCG GTGCGCAGGA GACCGACATC TTCATCACGC CCGGCTTCGC CTTCCAGGTG
GTCGACCGGC TGGTCACCAA CTTCCACCTG CCCAAGAGCA CGCTGCTGAT GCTGGTGAGC
GCCTTTGCCG GCCACGCCAC GATGCACGCG CTCTACCGGC ACGCGATTTC GCGCGGCTAC
CGCTTCTTCA GCTATGGCGA CGCCATGTTG CTGACACGCA GCAGCGCCTG A
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| Protein sequence | MNTAYTVADF DFDLPPELIA QHPAPERSGS RLLDASAPAQ PVDRIFHELP GLLNPGDLLV
FNDTQVIRAR LFGAKDSGGA VEALVERVLP AAAGGGHEVW AHLRASKSPR AGQSVLFRND
QGEQFSADVL GRCGPEDSLF HLRFPSDAFA LLERYGHVPL PPYITHADEA DDVRRYQTVF
ARHPGAVAAP TAALHFDEAL LAALEARGVR RASVTLHVGA GTFQPVRVDR LDQHRMHSEW
FEVPQATVDA IAATRAAGGK VVAVGTTTLR ALESAARGGV LRAGAQETDI FITPGFAFQV
VDRLVTNFHL PKSTLLMLVS AFAGHATMHA LYRHAISRGY RFFSYGDAML LTRSSA
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