| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1571 |
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| Symbol | |
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| ID | 6163270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1670384 |
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| End bp | 1671139 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641664325 |
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| Product | TonB family protein |
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| Protein accession | YP_001790603 |
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| Protein GI | 171058254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.265243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATGA ACGCTTCCAC GATGACCGCA TCCGCGTCCG ACACGCTGGT CCCTGCCGTG
CCGTGGCATG GCGCCGCACC GTCGCACGAG GTGCTGGGCC CGGGCGCCCG CCGCGTGCTG
GTCGGCGCGA TGCTGGGCGC GCACCTGCTG GCCGGCTGGG CGCTGCTGCA GGTGCCGGCG
GTGCGCCAAG TGGCGGCCGA GCTGGCGCCG ATCATGGTCG ACCTGATCGC GCCGGTGCCG
CAGGCGCCGC CCAAGCCGCC GCCGCCCGCA CCGCGTCCGG TGCAGCCGCG CACGCCGCCA
CCCCCCGCGC CGCTGCTGGC GGCCACGCCG CCGCCGGTGC CGATGCCGGA GCCGGTCTTC
ACCGCACCCC CACCGCCCGA GCCGCCCGCC TTGCCGGCGC CCACCGCGCC GATCGCCCCG
CCCGCACCGC CGCTGCAGAC GCCGCAGGCC GCACCCGCCG CGGTGCCGGC CGCGCCGCGC
AAGGTCGTGC TGACCGACAC CGACTGGGTG CGACCGCCCG CCTACGCCTA CCCGCGTGAA
GCTGCCCGGC TGCGCGAGCA GGGCACGGTG GTGGTGCGCA TCCGCTTCGA CGTGCGCGGC
CTGCCGAGCC GGGTCGAGCT GCTGCGCTCG TCGGGCTCGG CCCGGCTCGA CGACGAGGTG
CTCGCCAAGG CCCGCGCCGC GCGCGCCAAG CCGCGTCTGC AGGACGGCGT GCCGATCGAG
TTCCTGGCCG ATTCGGAAGC CGAATTCAAG TTCTGA
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| Protein sequence | MHMNASTMTA SASDTLVPAV PWHGAAPSHE VLGPGARRVL VGAMLGAHLL AGWALLQVPA
VRQVAAELAP IMVDLIAPVP QAPPKPPPPA PRPVQPRTPP PPAPLLAATP PPVPMPEPVF
TAPPPPEPPA LPAPTAPIAP PAPPLQTPQA APAAVPAAPR KVVLTDTDWV RPPAYAYPRE
AARLREQGTV VVRIRFDVRG LPSRVELLRS SGSARLDDEV LAKARAARAK PRLQDGVPIE
FLADSEAEFK F
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