Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1568 |
Symbol | |
ID | 6163380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1667073 |
End bp | 1667219 |
Gene Length | 147 bp |
Protein Length | 48 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641664322 |
Product | hypothetical protein |
Protein accession | YP_001790600 |
Protein GI | 171058251 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4256] Hemin uptake protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.652462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCCCG TCATGTCCGA TGGCGCCGCG CCGCGGGTGC GCAGCGAAGA CCTTCTGCGC GGTGCGCAGG AGCTGCTGAT CGACCACCAG GGCGCCTGCT ACCGCCTGCG CCTGACCGCG CAAGGGCGGT TGATCCTGAC CAAATAA
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Protein sequence | MVPVMSDGAA PRVRSEDLLR GAQELLIDHQ GACYRLRLTA QGRLILTK
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