Gene Lcho_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1568 
Symbol 
ID6163380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1667073 
End bp1667219 
Gene Length147 bp 
Protein Length48 aa 
Translation table11 
GC content68% 
IMG OID641664322 
Producthypothetical protein 
Protein accessionYP_001790600 
Protein GI171058251 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4256] Hemin uptake protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.652462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCCG TCATGTCCGA TGGCGCCGCG CCGCGGGTGC GCAGCGAAGA CCTTCTGCGC 
GGTGCGCAGG AGCTGCTGAT CGACCACCAG GGCGCCTGCT ACCGCCTGCG CCTGACCGCG
CAAGGGCGGT TGATCCTGAC CAAATAA
 
Protein sequence
MVPVMSDGAA PRVRSEDLLR GAQELLIDHQ GACYRLRLTA QGRLILTK