| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1565 |
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| Symbol | |
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| ID | 6163377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1665083 |
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| End bp | 1665469 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664319 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001790597 |
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| Protein GI | 171058248 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3744] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC TGCTCGACAC CCACGTCTTC CTTTGGTGGG TGGCCGATCA CCCCTCTCTG
TCGCCGCTCG CCCGCAGTGC GATCGCCGAT GCCGGCAACG AATGCCTGGT CAGCGTGGTG
AGCTGCTGGG AACTGGCCAT CAAGACCAGC CTGGGCAAGC TCGAACTCGG CCAGAGCCTG
GAGCGGTTCG TGCCCGAACA ACTGGCGGCC AACCAGTTCC AGCTGCTGCC GATGGACCTG
CGCCACACCC TGCGGGTGGC CGCCCTGCCC TGGCACCACC GCGACCCGTT CGACCGCCTG
CTGGTGGCGC AGTGCCAGGC CGAAGGCCTG ACGCTGGTCA GCGCCGATGG CGCCATGGCC
GCCTACGGCC TGCCGGTGCT GTGGTGA
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| Protein sequence | MRLLLDTHVF LWWVADHPSL SPLARSAIAD AGNECLVSVV SCWELAIKTS LGKLELGQSL
ERFVPEQLAA NQFQLLPMDL RHTLRVAALP WHHRDPFDRL LVAQCQAEGL TLVSADGAMA
AYGLPVLW
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