| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1561 |
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| Symbol | |
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| ID | 6163417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1657680 |
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| End bp | 1658804 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664315 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_001790593 |
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| Protein GI | 171058244 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTG ACACCGCCCT GCTGCAAACC CCGCTGCACG AACTGCACCT CGAACTCGGC
GCACGCATGG TGCCGTTCGC CGGCTACGCC ATGCCGGTCA ACTACCCCGG CGGCATCCTG
GCCGAACACC GCCAGTGCCG CAGCGGCGCG GCGCTGTTCG ACGTCTCGCA CATGGGCCAG
GTGCGGCTGA TCGGCAGCGA TGCCGACCGT GCGCTCGAGA GCCTGGTGCC GGTCGACGTG
GTCGATCTGG CGATCGGCAA GCAGCGTTAC GCCTTCTTCA CCAACGAGGC CGGCGGCCTG
CTCGACGACC TGATGATCAC GCGCCGCGAG GACGACCTGT TCCTGGTCGT CAACGCCGGC
TGCAAGGCGG CCGACATCCG CCACCTGATC ACCCACATCG GCCACCGCTG CCAGATCGTG
CCGATGCCCG ACCACGCCCT GCTGGCGCTG CAAGGCCCGC AGGCCGTGAC GGCGCTGGCG
CGCCTGAACG CCGGCGTGGC GGGCCTGACC TTCATGAGCG GCGGCCACTT CGCGCTGGCC
GGCGCCGACT GTTTCGTGAC CCGCTCGGGC TACACCGGCG AGGACGGCTT CGAGATCTCG
GTGCCCGCCA CCCACGCGGT CGCGCTGGCG CGCAGCCTGC TGGCGCAGCC CGAGGTGCAG
CCCGCCGGCC TGGGCGCGCG TGACACCCTG CGGCTCGAAG CCGGCCTGTG CCTGTACGGC
CACGACATCC ACGCCAGCAC CACGCCGGTC GAAGCCGGCC TGACCTGGGC GATCCAGAAG
GTGCGCCGCC CCGGTGGCGC GCGTGCCGGC GGTTATCCGG GCGCCAAGGT CATCGAGGGC
CAGCTGGCGC AGGGCCCGTC GCACAAACGT GTCGGCCTGG TCGGGCTGGA GCGCGCGCCG
GTGCGCGAGG GCGCCACGCT GGTCGACAAC CACGGCAGCC ACAAGCTCGG CACCGTGACC
AGCGGCACCA CCGGGCCGAG CGTCAACCAG CCGATCGCGA TGGCCTACGT GGCCACCAAC
CACGCCGGGC CGGGCAACCT GATGTACGCC GAAGTGCGTG GCAAGCGCCT GCCGATGAAA
GTGGTGCCGC TGCCGTTTGC GCCGCACCGA TACTTCCGGG GTTGA
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| Protein sequence | MSADTALLQT PLHELHLELG ARMVPFAGYA MPVNYPGGIL AEHRQCRSGA ALFDVSHMGQ
VRLIGSDADR ALESLVPVDV VDLAIGKQRY AFFTNEAGGL LDDLMITRRE DDLFLVVNAG
CKAADIRHLI THIGHRCQIV PMPDHALLAL QGPQAVTALA RLNAGVAGLT FMSGGHFALA
GADCFVTRSG YTGEDGFEIS VPATHAVALA RSLLAQPEVQ PAGLGARDTL RLEAGLCLYG
HDIHASTTPV EAGLTWAIQK VRRPGGARAG GYPGAKVIEG QLAQGPSHKR VGLVGLERAP
VREGATLVDN HGSHKLGTVT SGTTGPSVNQ PIAMAYVATN HAGPGNLMYA EVRGKRLPMK
VVPLPFAPHR YFRG
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