| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1545 |
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| Symbol | |
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| ID | 6161592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1640748 |
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| End bp | 1641461 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664300 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001790578 |
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| Protein GI | 171058229 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.328783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC TCATCACGTC CGAAGCCGAA GCCACGCCTG ACACCGGCTT CGCGCCGCTG
CTGGCACTGG TGATGCGCGA CCTGCGCCTG GCCGCGCGCC GGCGCAGCGA GGCGGCGCTG
CCGCTGGTGT TCTTCATCGT CGCCGCCGGG CTGTTCCCGC TCGGCGTCGG GCCCGAGACC
GAAACCCTGC GCCAGATCGC GCCGGGCGTG GTGTGGGTCT GCGCGCTGCT GGCGGCGATG
CTGTCGATCA ACCAGCTCTA CGCCGCCGAC CACGCCGACG GCTCGCTCGA GCAGATGCTG
CTGAGCGGCC AGCCGCTGGC GCTGGTCGCG CTGGCGCGGT CGCTGTCGCA CTGGCTGCTG
ACGGGGCTGC CGCTGGTGCT GACGGCGCCG CTGTTCGGCG TCATGTTCGA CCTGTCGGCC
GAGGGCATCG GCTCGCTGGT GATCGGGCTG CTGCTGGGCA CGCCGGTGCT GAGCCTGCTC
GGCAATGTCG GTGCGGCGCT CACGCTGGGC CTGCGCAGCG GCGGCATGCT GGTGTTCCTG
CTGGTGCTGC CGCTGGCGGT GCCGGTACTT ATTTTTGGAA CTGGCGCCGT GGCGGCGGTC
GAAGTGGGTA TGTCGCCTCA GCCACACTAC GCCCTGCTCG GCGCCCTGTT GATCGCCACC
GCCGGCCTCG CCCCGCTGGC CAGCGGGGCG GCCTTGCGGA TCTCGACCGA ATGA
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| Protein sequence | MSALITSEAE ATPDTGFAPL LALVMRDLRL AARRRSEAAL PLVFFIVAAG LFPLGVGPET
ETLRQIAPGV VWVCALLAAM LSINQLYAAD HADGSLEQML LSGQPLALVA LARSLSHWLL
TGLPLVLTAP LFGVMFDLSA EGIGSLVIGL LLGTPVLSLL GNVGAALTLG LRSGGMLVFL
LVLPLAVPVL IFGTGAVAAV EVGMSPQPHY ALLGALLIAT AGLAPLASGA ALRISTE
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