| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1544 |
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| Symbol | |
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| ID | 6161591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1640047 |
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| End bp | 1640751 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664299 |
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| Product | heme exporter protein CcmA |
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| Protein accession | YP_001790577 |
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| Protein GI | 171058228 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.123842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTGGACG TTACGACTTC TGAGTCGCCA TCCGATGCGT CCCTGCACGC TGGCGGGGCC
TGCCTGCGCG CCGTCGATCT CGCCTGCCGG CGCGGCGAGC GCCGCCTCTT CAGCGGCCTG
AACCTGCAGC TCCAGCCCGG CCGGCTGATC TGGCTGCGCG CCGACAACGG CCGCGGCAAG
ACCAGCCTGC TGCGCCTGCT GGCCGGCCTG GCGGCGCCCG AGTCCGGTGA CGTGCTGCTG
GCCGACCGGC CGGTGCGCAA GGCCGCGGCG CTCGGGCTGC GACCGGTCTA CATCGGCCAT
GCCAACGGCC TGAAAGAGGA TCTGAGCGCG GCCGAGACGC TGACCTTCAT GGCGCGCCTG
CACGGTCGTT CGACCGGGCA GGGCGGGGCG GCGGTGCCCG CGGCGCTGAC GCGCATGGGC
ATGGCCAGCC GGATCGACGC GCCGGTGCGC ACGCTCTCGC AGGGCCAGCG CCGCCGGGTC
GCGCTGGCGC GGCTGGCGCT CGAGGACGCG CCGCTGCCGT GGATCCTCGA CGAGCCCTAC
GACGCGCTCG ACAGCGCCGG CATCGGCGCG CTCGACGGCC TGCTGGGCGA ACACCTGGCG
CGTGGCGGCA GCGCCATCCT CACCAGCCAC CAGCCGCTGG CCGCCACCGC GCCGCCGGCG
CAGACGGTCT GGCTGGGCCG CAATGGCGTC GAGGAGCGCT CATGA
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| Protein sequence | MVDVTTSESP SDASLHAGGA CLRAVDLACR RGERRLFSGL NLQLQPGRLI WLRADNGRGK
TSLLRLLAGL AAPESGDVLL ADRPVRKAAA LGLRPVYIGH ANGLKEDLSA AETLTFMARL
HGRSTGQGGA AVPAALTRMG MASRIDAPVR TLSQGQRRRV ALARLALEDA PLPWILDEPY
DALDSAGIGA LDGLLGEHLA RGGSAILTSH QPLAATAPPA QTVWLGRNGV EERS
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