Gene Lcho_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1528 
Symbol 
ID6161620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1614090 
End bp1614890 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID641664283 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_001790561 
Protein GI171058212 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.168715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT CGACCGCATC GTTCGAGGCC GTCACGGCGA TGTTCGCGCG GGTCTCGGGC 
ATCCGCCTGA GCCCCGCCAA GAAGCCGCTG GTCGAAGGCC GGCTGCAACG CATGGCGCAG
GACGCCGGCC ACGCCCGGCT CGACGACTAC GTGCACGCGC TGCTCGAAGC CGCCGACCCG
AAGGAGCTGA CGCGGGTGGT CGACAAGCTG ACCACCAACG AGACCTATTT CTTCCGCGAG
CCGGAGCACT TCGATCACCT GCGGCAACTG CTGCGCGACC AGCCGCCGGA CGGGCCGCTG
CGGGTCTGGA GCGCGGCGAG CTCGTCGGGT GAGGAGGCCT TCAGCATCGC CATGCTGCTG
GCCGAGGAAC TCGGGCGGCG CGACTGGTCG GTGATCGGCA CCGACCTGTC GACCGCGGTG
GTGCAGCAGG CCCAGCGCGC GCTCTACCCG ATGGAGCGGG CGCGCAACCT GCCGCAGGCA
CTGCTCAAGC GCTACTGCCT GCGCGGCGAG GGCGACTACG CCGGCCAGCT GCTGATCCAG
CGCGCCCTGC GCGAGCGCGT GAGCTTCCGC TGCGCCAACC TGATGCAGGA GATGCCGCGC
GACCTGGGGC AGTTCGACAT CATCTTCCTG CGCAACGTGC TGATCTATTT CGACCCGCCC
GGCAAGGCCA GGATCGTGCG ACGCGTGCTC GCCCACCTCA AGCCCGACGG GCTTCTCTAC
ACCGGCCATG CTGAATCGCT CGCCAACCTC GAACTCCCGG TTCGCTCCGT CGCGCCTGCC
GTCTACACAC ACGGCGGCTG A
 
Protein sequence
MTLSTASFEA VTAMFARVSG IRLSPAKKPL VEGRLQRMAQ DAGHARLDDY VHALLEAADP 
KELTRVVDKL TTNETYFFRE PEHFDHLRQL LRDQPPDGPL RVWSAASSSG EEAFSIAMLL
AEELGRRDWS VIGTDLSTAV VQQAQRALYP MERARNLPQA LLKRYCLRGE GDYAGQLLIQ
RALRERVSFR CANLMQEMPR DLGQFDIIFL RNVLIYFDPP GKARIVRRVL AHLKPDGLLY
TGHAESLANL ELPVRSVAPA VYTHGG