Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1528 |
Symbol | |
ID | 6161620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1614090 |
End bp | 1614890 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664283 |
Product | MCP methyltransferase, CheR-type |
Protein accession | YP_001790561 |
Protein GI | 171058212 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.168715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGT CGACCGCATC GTTCGAGGCC GTCACGGCGA TGTTCGCGCG GGTCTCGGGC ATCCGCCTGA GCCCCGCCAA GAAGCCGCTG GTCGAAGGCC GGCTGCAACG CATGGCGCAG GACGCCGGCC ACGCCCGGCT CGACGACTAC GTGCACGCGC TGCTCGAAGC CGCCGACCCG AAGGAGCTGA CGCGGGTGGT CGACAAGCTG ACCACCAACG AGACCTATTT CTTCCGCGAG CCGGAGCACT TCGATCACCT GCGGCAACTG CTGCGCGACC AGCCGCCGGA CGGGCCGCTG CGGGTCTGGA GCGCGGCGAG CTCGTCGGGT GAGGAGGCCT TCAGCATCGC CATGCTGCTG GCCGAGGAAC TCGGGCGGCG CGACTGGTCG GTGATCGGCA CCGACCTGTC GACCGCGGTG GTGCAGCAGG CCCAGCGCGC GCTCTACCCG ATGGAGCGGG CGCGCAACCT GCCGCAGGCA CTGCTCAAGC GCTACTGCCT GCGCGGCGAG GGCGACTACG CCGGCCAGCT GCTGATCCAG CGCGCCCTGC GCGAGCGCGT GAGCTTCCGC TGCGCCAACC TGATGCAGGA GATGCCGCGC GACCTGGGGC AGTTCGACAT CATCTTCCTG CGCAACGTGC TGATCTATTT CGACCCGCCC GGCAAGGCCA GGATCGTGCG ACGCGTGCTC GCCCACCTCA AGCCCGACGG GCTTCTCTAC ACCGGCCATG CTGAATCGCT CGCCAACCTC GAACTCCCGG TTCGCTCCGT CGCGCCTGCC GTCTACACAC ACGGCGGCTG A
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Protein sequence | MTLSTASFEA VTAMFARVSG IRLSPAKKPL VEGRLQRMAQ DAGHARLDDY VHALLEAADP KELTRVVDKL TTNETYFFRE PEHFDHLRQL LRDQPPDGPL RVWSAASSSG EEAFSIAMLL AEELGRRDWS VIGTDLSTAV VQQAQRALYP MERARNLPQA LLKRYCLRGE GDYAGQLLIQ RALRERVSFR CANLMQEMPR DLGQFDIIFL RNVLIYFDPP GKARIVRRVL AHLKPDGLLY TGHAESLANL ELPVRSVAPA VYTHGG
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