| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1517 |
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| Symbol | |
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| ID | 6163343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1602613 |
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| End bp | 1604031 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664272 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001790550 |
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| Protein GI | 171058201 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.105357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCGC AGGCTGCCGC GCTGCTCGCG GCCCTGCGCC AGTGCCTGGG CGCCGAGCAG
GTGCTGTGCG ACGGCGATCT GAGCGCCTAC GAGATCGACC GTCGGCGCCG CTATCACGGC
CGCGCGCTGG CGGTGCTCAG GCCGGGCTCG ACCGATGAAG TCGCTCAGGT GCTGCGCCTG
GCTGCCGCCC ACGGCGTCGC GGTCGTCACG CAGGGTGGCA ACACCGGCCT GGTCGGCGGC
TCGGTGCCCG ACGCGTCGGG CGCGCAGCTG CTGCTGTCGC TGCAGCGCCT GAACCGGGTG
CGCCGGCTCG ACGCCGCCAA CCTGACGCTG ACGGTCGAGG CCGGCTGCAT CCTGCAAGCC
GCCCAGGAGG CGGCCGCGTC GGCCGACCTG CTGCTGCCGC TGAGCCTGGC CGCCGAAGGC
AGCTGCACGG TCGGCGGCAA CCTGGCCACC AACGCCGGCG GCGTGCAGGT GCTGCGCTAC
GGCAATGCAC GCGAGCTGTG CCTGGGCCTC GAAGTGGTGA CGCCGCACGG CGAGATCTGG
GACGGCCTGC GCGGCCTGCG CAAGGACAAC ACCGGCTACG ACCTGCGTGA TCTCTACATC
GGCAGCGAGG GCACGCTGGG CGTGATCACC GCGGCGGTGC TGCGGCTGTA TCCGCAGCCG
CGTGCGGTGC TGACGGCGCT GGCCACCTGC GCCACGCTGG AAGACTGCCT GAATCTGCTG
CAGCGCGCCC AGGCCCGCAG CGGCGCCACA TTGACCGCCT TCGAGGTGAT GAACGCGCAG
TCGCTGGCGC TGGTGCAGCA GCACTTCGCG GCCGCCGCAC TGCCGTCCAT GCCGGCCGCG
CCGTGGACGG TGCTGCTGGA AGTGTCCGAC GCCCGAAACG AGCAGCACGC CGCCACCCTG
CTCGAATCGC TGCTGGCCGA CGCAGTGGCC GCCGGACTGA TCGACGACGC CCTGGTGGCG
CAGAGCCTGA CGCAGTCGCG CACCTTCTGG CGCCTGCGCG AGACCATCCC GCTCGCCCAG
GCGGCCGACG GCTTGAACAT CAAGCACGAC ATCGCGCTGC CGGTGTCGCG CATCCCGGCC
TTCGTGGTAC AGGCCGACGC CGCCGTGCAG GCCCAATGCC CGGGCGCCCG CAGCGTCAAC
TTCGGCCACC TGGGCGACGG CAACCTGCAC TACAACGTGA TGGCACCCGC AGGCGTGGCA
CCGGCCGAGT TCCTGGTCGC GAACGAGGAT GCGGTCAACC GGCGCGTCTA CGACCTGGTG
AACGCCCACG GCGGCTCGAT CTCGGCCGAA CACGGCATCG GCGTGCTCAA GCGCGACGAA
CTGCTGCGAC ACCAGTCACC CGTCGCGCTG GCACTGATGC AGCGCATCAA GGCGGCGCTC
GATCCGCAGG GACTGATGAA TCCGCAGCGC CTGCTGTGA
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| Protein sequence | MTAQAAALLA ALRQCLGAEQ VLCDGDLSAY EIDRRRRYHG RALAVLRPGS TDEVAQVLRL
AAAHGVAVVT QGGNTGLVGG SVPDASGAQL LLSLQRLNRV RRLDAANLTL TVEAGCILQA
AQEAAASADL LLPLSLAAEG SCTVGGNLAT NAGGVQVLRY GNARELCLGL EVVTPHGEIW
DGLRGLRKDN TGYDLRDLYI GSEGTLGVIT AAVLRLYPQP RAVLTALATC ATLEDCLNLL
QRAQARSGAT LTAFEVMNAQ SLALVQQHFA AAALPSMPAA PWTVLLEVSD ARNEQHAATL
LESLLADAVA AGLIDDALVA QSLTQSRTFW RLRETIPLAQ AADGLNIKHD IALPVSRIPA
FVVQADAAVQ AQCPGARSVN FGHLGDGNLH YNVMAPAGVA PAEFLVANED AVNRRVYDLV
NAHGGSISAE HGIGVLKRDE LLRHQSPVAL ALMQRIKAAL DPQGLMNPQR LL
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