| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1513 |
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| Symbol | |
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| ID | 6163339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1598469 |
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| End bp | 1599941 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641664268 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001790546 |
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| Protein GI | 171058197 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00366776 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTACC TCTCGCTCTC CATCTGGGTG CCGATCGCCT TCGGTGCTCT TCTTCTCGCC
CTCGGCCGTG ACGAAAACGC CAACGTCACG CGCTGGATCG CGCTGGTCGG CGCGCTGGTC
AGTTTCCTGA TCACCTTGCC GCTGATCGGC AGCTTCGACA CGGCGACTGC CGCGATGCAG
TTCCAGGAGA ACCTGCCCTG GATCGAGCGC TTCAACGTGC GCTATCACCT CGGCGTGGAC
GGCATCTCGG TCTGGTTCGT GCTGCTGACC GCCTTCATCA CCGTGATCGT CGTGATCTCG
GCCTGGGAGG TGATCGAGAA GCGCGTGCAT CAGTACATGG GCGCCTTCCT GATCCTCTCC
GGCCTGATGG TCGGCGTGTT CAGCGCGGTC GACGGCATGC TGTTCTACGT GTTCTTCGAG
GCCACGCTGA TCCCGATGTA CCTGATCATC GGCATGTGGG GCGGTGCCCG GCGTGTCTAT
GCGGCGTTCA AGTTCTTCCT GTACACGCTG GCCGGCTCGT TGCTGATGCT GATCGCGCTG
ATCTTCCTGT ACTACAAGTC GGGTGGCAGC TTCGAGATCC TGACCTGGCA CGCACTGCCG
CTGGGCGAGA CGCCGCAGAT GCTGCTGTTC TTCGCCTTCT TCGCGGCCTT TGCCGTCAAG
GTGCCGATGT GGCCGGTGCA CACCTGGCTG CCCGACGCCC ACGTCGAGGC GCCCACCGGC
GGCTCGGTCG TGCTGGCGGC GATCATGCTC AAGCTCGGTG CCTACGGCTT CCTGCGCTTC
TCGCTGCCGA TCGTGCCGGA TGCGGCCATG ACCTACGCGC CCTTCATCAT CACGATCTCG
CTGGTCGCGG TGATCTACAT CGGCCTGGTC GCGCTGGTGC AGAAGGACAT GAAGAAGCTG
GTGGCGTATT CGTCGATCGC CCACATGGGC TTCGTCACGC TGGGCTTCTT CATCTTCAGC
GAGCTGGGCA TCTCCGGCGG CCTGGTGCAG ATGATCTCGC ACGGCTTCGT GTCGGGCGCG
ATGTTCCTGT CGATCGGCGT GCTGTACGAC CGCGTGCATT CGCGTGAGAT CGCGGCCTAT
GGCGGCGTGG TCAACACGAT GCCCAAGTTC ACCGCGTTTG CCGTCTTCTT CGGCATGGCC
AACTGCGGCC TGCCGGGCAC CGCCGGATTC ATCGGCGAGT GGATGGTGAT CCTGGGCGCC
GTGAAGTACA ACTTCTGGAT CGGCCTGCTG GCGGCGACGG CGCTGATCTT CGGCGCGGCC
TACACGCTGT GGATGATCAA GCGGGTGTAT TTCGGCGATG TCGCCAACGA CGACGTGCGC
GAACTCACCG ACATCAATGC CCGCGAGTTC CTGATGCTGG CGCTGCTGGC CATCGCCACG
CTGGCGATGG GTCTGTATCC GAAGCCCTTC ACCGACGTGA TGCACACCTC GGTGACCGAG
CTGATCCGCC ACGTTGGCGT GTCGAAACTT TGA
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| Protein sequence | MAYLSLSIWV PIAFGALLLA LGRDENANVT RWIALVGALV SFLITLPLIG SFDTATAAMQ
FQENLPWIER FNVRYHLGVD GISVWFVLLT AFITVIVVIS AWEVIEKRVH QYMGAFLILS
GLMVGVFSAV DGMLFYVFFE ATLIPMYLII GMWGGARRVY AAFKFFLYTL AGSLLMLIAL
IFLYYKSGGS FEILTWHALP LGETPQMLLF FAFFAAFAVK VPMWPVHTWL PDAHVEAPTG
GSVVLAAIML KLGAYGFLRF SLPIVPDAAM TYAPFIITIS LVAVIYIGLV ALVQKDMKKL
VAYSSIAHMG FVTLGFFIFS ELGISGGLVQ MISHGFVSGA MFLSIGVLYD RVHSREIAAY
GGVVNTMPKF TAFAVFFGMA NCGLPGTAGF IGEWMVILGA VKYNFWIGLL AATALIFGAA
YTLWMIKRVY FGDVANDDVR ELTDINAREF LMLALLAIAT LAMGLYPKPF TDVMHTSVTE
LIRHVGVSKL
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