Gene Lcho_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1510 
Symbol 
ID6161400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1595475 
End bp1596125 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID641664265 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001790543 
Protein GI171058194 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00574767 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACACCA CCACCGCGCT CTTCTACGTC TTTTCCGCCG TCTTGCTCTT TGCGGCGTTC 
CGGGTCATCA CCGCCCGCAG TCCGGTTCAC GCCGCGCTGT ACCTGGTGCT GGCGTTCTTC
ACCGCATCGT GCGTCTGGAT GTTGCTGCAG GCCGAGTTCC TGGCGATCTC GCTGGTGCTG
GTCTATGTCG GCGCCGTGAT GGTGCTGTTC CTGTTCGTCG TCATGATGCT CGACATCAAC
GTCGATGTGC TGCGGCAGGG TTTCTGGTCG CACTTCCCGG TTGCTGCCAC GGTCGGCGTG
ATCATCGCGC TGGAGATGGC AGTGGTGCTG CTGCGCGGCT TCAACCTGCC GATCGCCAAG
GCGATGCCGG GTGCCGCCGA AGGTGTTCCC AACACCAAGC TGCTGGGGAT CGAGCTCTAC
ACCGACTACC TCTACCCGCT GGAGATCGCC GCGGTGATCC TGCTGGTGGC GATCATTGCC
GCGATCGCGC TGACCCTGCG TCGTCGCAAG GACGTCAAGG GCCAGAACCC GGCCGAACAG
GTCAAGGCCA AGAAGGCCGA TCGCCTGCGC ATCGTCAAGA TGGATCCGGT GCGTGCCGTG
CCCTCCGCGC CGGCCGCCGC CGATGCCACC GCACCGAAAG GACAAGCCTG A
 
Protein sequence
MDTTTALFYV FSAVLLFAAF RVITARSPVH AALYLVLAFF TASCVWMLLQ AEFLAISLVL 
VYVGAVMVLF LFVVMMLDIN VDVLRQGFWS HFPVAATVGV IIALEMAVVL LRGFNLPIAK
AMPGAAEGVP NTKLLGIELY TDYLYPLEIA AVILLVAIIA AIALTLRRRK DVKGQNPAEQ
VKAKKADRLR IVKMDPVRAV PSAPAAADAT APKGQA