Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1510 |
Symbol | |
ID | 6161400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1595475 |
End bp | 1596125 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641664265 |
Product | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 |
Protein accession | YP_001790543 |
Protein GI | 171058194 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00574767 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACACCA CCACCGCGCT CTTCTACGTC TTTTCCGCCG TCTTGCTCTT TGCGGCGTTC CGGGTCATCA CCGCCCGCAG TCCGGTTCAC GCCGCGCTGT ACCTGGTGCT GGCGTTCTTC ACCGCATCGT GCGTCTGGAT GTTGCTGCAG GCCGAGTTCC TGGCGATCTC GCTGGTGCTG GTCTATGTCG GCGCCGTGAT GGTGCTGTTC CTGTTCGTCG TCATGATGCT CGACATCAAC GTCGATGTGC TGCGGCAGGG TTTCTGGTCG CACTTCCCGG TTGCTGCCAC GGTCGGCGTG ATCATCGCGC TGGAGATGGC AGTGGTGCTG CTGCGCGGCT TCAACCTGCC GATCGCCAAG GCGATGCCGG GTGCCGCCGA AGGTGTTCCC AACACCAAGC TGCTGGGGAT CGAGCTCTAC ACCGACTACC TCTACCCGCT GGAGATCGCC GCGGTGATCC TGCTGGTGGC GATCATTGCC GCGATCGCGC TGACCCTGCG TCGTCGCAAG GACGTCAAGG GCCAGAACCC GGCCGAACAG GTCAAGGCCA AGAAGGCCGA TCGCCTGCGC ATCGTCAAGA TGGATCCGGT GCGTGCCGTG CCCTCCGCGC CGGCCGCCGC CGATGCCACC GCACCGAAAG GACAAGCCTG A
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Protein sequence | MDTTTALFYV FSAVLLFAAF RVITARSPVH AALYLVLAFF TASCVWMLLQ AEFLAISLVL VYVGAVMVLF LFVVMMLDIN VDVLRQGFWS HFPVAATVGV IIALEMAVVL LRGFNLPIAK AMPGAAEGVP NTKLLGIELY TDYLYPLEIA AVILLVAIIA AIALTLRRRK DVKGQNPAEQ VKAKKADRLR IVKMDPVRAV PSAPAAADAT APKGQA
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