| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1506 |
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| Symbol | |
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| ID | 6161396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1590110 |
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| End bp | 1591468 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664261 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_001790539 |
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| Protein GI | 171058190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00816775 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTCG ATCTCTCCCA AGTGCTGGCC GGCTTCCAGG CCACCGGCAC CGAAACCTGC
TTTCACGACC GCCACATCAA CTCGCAGATC TATGCGGGCC TGAACGGCAA GAACTGGCGC
CTGGCCGACT ACGAAGCGCG TGGCGGCTAC CAGGCGCTGC GCAAGATCCT CGGCGCCGAC
GGCGGCGAGG GCATGACCGC CGATCAGGTG ATCGCCGAGG TCAAGGGTTC GGGTCTGCGC
GGCCGGGGCG GTGCGGGTTT CCCGACCGGC CTCAAGTGGA GTTTCATGCC GCGCGCCCTG
CCGGTGCAGA AGTACCTGGT CTGCAACTCC GACGAGGGTG AGCCGGGCAC GTGCAAGGAT
CGCGACATCC TGCGCTACAA CCCGCACATC GTCATCGAAG GCATGATCAT CGCGGCCTAC
GCGATGGGCA TCACGGTCGG CTACAACTAC ATACACGGCG AGATCTTCGA CGCCTACGAG
CGTTTCGAAG AGGCGCTCGA GGAAGCGCGT GCCGCCGGCT ATCTGGGCAA CCAGATCCTG
GGCAGCAGGC ACACCTTCCA GCTGCACGCC TTCCACGGTT TCGGCGCCTA CATCTGCGGT
GAAGAGACCG CGCTGCTCGA ATCGCTCGAA GGCAAGAAGG GCCAGCCGCG CTTCAAGCCG
CCGTTCCCGG CCAGCTTCGG CCTGTACGGC AAGCCGACCA CGATCAACAA CACCGAAACC
TTCGCGGCGG TGCCCTGGAT CATCCGCAAC GGCGGTCCGG CCTACCTCGA ATGCGGCAAG
CCCAACAACG GCGGCACCAA GATCTTCTCG ATGGTCGGTG ACGTCGAACG TCCGGGCAAC
TACGAGATCC CGATGGGCAC GCCGTTCAGC ACGCTGCTGG AGCTCGCCGG TGGCGTCAAG
GGTGGCAAGA AGCTCAAGGC CGTGATCCCT GGCGGATCGT CGTCGCCGGT GCTGCCGGCC
GACGTCATGA TGGCCTGCAC GATGGACTAT GACTCCATCA GCAAGGCCGG TTCGATGCTC
GGTTCGGGCG CCGTGATCGT GATGGACGAC ACCCGCTGCA TGGTCAAGAG CCTGCTGCGC
CTGTCGTACT TCTACAGCCA CGAAAGCTGC GGCCAGTGCA CGCCGTGCCG CGAAGGCACC
GGCTGGCTGT GGCGCATCGT CGACCGCATC GAACACGGCC ATGGCCGTGC CGAAGACCTG
GCGCTGCTCG ACAACGTGGC CGAGAACATC ATGGGTCGCA CCATCTGCGC CCTCGGCGAT
GCCGCCGCGA TGCCCGTGCG CGCGATGCTC AAGCATTTCC GCCACGAGTT CGTCCACCAC
ATCGAGCACA AGACCTGCGT GGTCCCGGCT TACGTCTGA
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| Protein sequence | MTLDLSQVLA GFQATGTETC FHDRHINSQI YAGLNGKNWR LADYEARGGY QALRKILGAD
GGEGMTADQV IAEVKGSGLR GRGGAGFPTG LKWSFMPRAL PVQKYLVCNS DEGEPGTCKD
RDILRYNPHI VIEGMIIAAY AMGITVGYNY IHGEIFDAYE RFEEALEEAR AAGYLGNQIL
GSRHTFQLHA FHGFGAYICG EETALLESLE GKKGQPRFKP PFPASFGLYG KPTTINNTET
FAAVPWIIRN GGPAYLECGK PNNGGTKIFS MVGDVERPGN YEIPMGTPFS TLLELAGGVK
GGKKLKAVIP GGSSSPVLPA DVMMACTMDY DSISKAGSML GSGAVIVMDD TRCMVKSLLR
LSYFYSHESC GQCTPCREGT GWLWRIVDRI EHGHGRAEDL ALLDNVAENI MGRTICALGD
AAAMPVRAML KHFRHEFVHH IEHKTCVVPA YV
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