| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1499 |
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| Symbol | |
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| ID | 6162413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1585147 |
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| End bp | 1585893 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664253 |
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| Product | Triose-phosphate isomerase |
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| Protein accession | YP_001790532 |
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| Protein GI | 171058183 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0165539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGA ATCGCAAACT GGTGGTGGGC AACTGGAAGA TGCATGGCAG CCACGTTGCC
AATGCCGAGT TGCTGCAAGG CGTGCTGGCC GCTCGGCCCT TTGGCTGCGA CGTGGCGGTG
TGTGCGCCGT TCCCCTATCT GTCCGAGGTG GCGGTGACGC TGGCCGGCAG CCCTCTTCTG
TGGGGTGCGC AGGATTGTTC GGCCCACGAG CAGGGCGCCT ACACCGGCGA GGTGTCGGCT
GCGATGCTGG CCGAGTTTGG CTGCCGCTAT GTCATCGTCG GCCACTCGGA GCGGCGCGCC
TATCACGCCG AATCCGACCA GCTGGTGGCC GACAAGGCCA AGGCCGCGCT GGCCCGAGGC
ATCACGCCGA TCGTCTGCGT CGGCGAGACG CTGGCGCAGC GTGAGGCCGG TGAAACGGCA
ACGGTGGTCA AGCGCCAGCT CTCGGTCGTG ATCCACGCCC TGACGCACTG CATCGGCGAA
ATCGTGGTTG CCTACGAGCC GGTCTGGGCG ATCGGCACCG GTCGCACGGC CACCCCGGAA
CAGGCTCAGG AAGTGCATGC CCTGCTGCGC GCCCAGCTGG CTGCCGCAAC GCCGCACGCC
GCGCAGATGA AATTGCTCTA TGGCGGCAGC GTCAAGCCTG ACAACGCCGA CTCGCTGTTC
GCTCAGCCCG ACATCGACGG TGGCCTGATC GGTGGCGCGG CGCTCAAGGC GGCCGACTTC
GTCGCCATCG TGCGCGCAGC CGGCTGA
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| Protein sequence | MDTNRKLVVG NWKMHGSHVA NAELLQGVLA ARPFGCDVAV CAPFPYLSEV AVTLAGSPLL
WGAQDCSAHE QGAYTGEVSA AMLAEFGCRY VIVGHSERRA YHAESDQLVA DKAKAALARG
ITPIVCVGET LAQREAGETA TVVKRQLSVV IHALTHCIGE IVVAYEPVWA IGTGRTATPE
QAQEVHALLR AQLAAATPHA AQMKLLYGGS VKPDNADSLF AQPDIDGGLI GGAALKAADF
VAIVRAAG
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