| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1495 |
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| Symbol | |
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| ID | 6162409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1580010 |
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| End bp | 1581176 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664249 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_001790528 |
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| Protein GI | 171058179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00201329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCCAAG TGATCGCCGA CCTGAGCGCC TCGCGCATCC GCGAGGTGGC CAACGCCGGC
CTGGGCCGCA GCGACGTGCT GGCCTTCTGG TTCGGCGAGA GCGACGAGAT CACGCCGATC
GGCGTGCGCG ATGCCGCAGT GGCGTCGATC GAGGCGGGCG AGACCTTCTA CGGCCACAAC
CTGGGTCTGC CGGAGCTGCG CCAGGCGCTG GCGCGCTACG TCAGCAGTCT GCACAAGCCC
GTGGGCGCCG AGCGCATCGC GGTGACGTCG TCGGGCGTGA GCGCGCTGAT GATCGCGCAG
CAGGCGCTGG TCGACGCCGG CGACGAGGTG GTGGCGGTCG TGCCGGTCTG GCCGAATCTG
GTCGCGCAGC CGGCCATCAT GGGTGCGCGC GTGCGCTGCA TCAGCCTGCA TCCGCGCAAC
GGCGCTTGGA TGCTCGATCT GGACGAGCTG CTGGCCGCCA TCACGCCGGC CACCCGGGTG
CTGATCGTCA ATGCGCCCAA CAACCCGACC GGCTGGACGC TGACTGCCGC CGAGCAACAG
GCGATCCTGG ATCACTGCCG CCGCACCGGC ACCTGGATCG TGTCCGACGA GGTCTACGAG
CGGCTCTATT TCCCCGATGC GGCGGATGCC GACGGTCAGG TCTGCGCGCC GAGCTTTCTC
GACATCGCCG AACCCGAGGA CCGGCTGCTG GTGGTGCACA GCTTCTCGAA GAGTTTCCTG
ATGACGGGCT GGCGGCTGGG TTGCCTGATC GCGCCGCCGT CGATCGTCGA GGAGCTCGGC
AAGCTGATCG AGTTCAACAC CTCGTGTGTT CCGGTGTTCG TGCAGCGCGC CGGGTTGGCG
GCGCTGGCCG AGGCGCCGCA GTCGGTACCG GCGCTGCAGG CGCATCTGCG GCGCTGTCGC
GACACGCTGA TCGACGCCCT GCAGCCGCTG CCGGGCATCG AGCTGGCGCG CCCGCGCGGG
GCAATGTATG CCTTCCTGCG GGTGCAGGGG CAGGACGACT CGCTGGCGCT GGCCAAGCGG
CTGGTGGTCG AGCACGGACT GGGCCTGGCC CCGGGCGTGG CCTTCGGTCC GCAGGGCGAG
GGCTGGCTGC GCTGGTGTTT CGCTTCGCGC GACCCGCAGC GCTTGCTCAA GGGTGTGGAG
CGGCTGGCGC GCGCGCTGCG TCTATAA
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| Protein sequence | MRQVIADLSA SRIREVANAG LGRSDVLAFW FGESDEITPI GVRDAAVASI EAGETFYGHN
LGLPELRQAL ARYVSSLHKP VGAERIAVTS SGVSALMIAQ QALVDAGDEV VAVVPVWPNL
VAQPAIMGAR VRCISLHPRN GAWMLDLDEL LAAITPATRV LIVNAPNNPT GWTLTAAEQQ
AILDHCRRTG TWIVSDEVYE RLYFPDAADA DGQVCAPSFL DIAEPEDRLL VVHSFSKSFL
MTGWRLGCLI APPSIVEELG KLIEFNTSCV PVFVQRAGLA ALAEAPQSVP ALQAHLRRCR
DTLIDALQPL PGIELARPRG AMYAFLRVQG QDDSLALAKR LVVEHGLGLA PGVAFGPQGE
GWLRWCFASR DPQRLLKGVE RLARALRL
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