| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1491 |
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| Symbol | |
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| ID | 6162308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1575775 |
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| End bp | 1576701 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664245 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001790524 |
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| Protein GI | 171058175 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00327558 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGACC TCCGCCTGTG GCGCCAGTTC CTGACGCTGG CCGACGAACT GCACTTCGGC
CGCGCCGCTC AGCGCCTGCA CATGACTCAG CCGCCGCTGA GCCAGGCGAT CCAGGGCCTG
GAGCGTGAAC TCGGCGTGGC GCTGTTCCTG CGCACGCGCC GCTCGGTGGC GCTGACACCC
GCCGGCGCCG CGCTGCTGCC GCCGGTGCGC CGGCTGCTGG CGGCGGCCGA GGAGCTGCCG
CGCATCGCCC AGGCCGCGGC GGCCGGCCTG GCCGGGCAGC TGCGCCTGGC CTTCATCTCG
TCGATCAGCT ACGGCCCGTT GCCCGAGTGG CTGCGCAGCT TCCGCGAGGC GCACCCCGAG
GTGGCGCTGA CGCTGCGCGA GGCCACGCTC GACGTGCAGC TCGCCGCCTT CGACGCCGAC
GAGATCGACG CCGGCTTCGT GCTGCACGCG CCCGGCGCCG CGCCGCCCAG CTTCGCCGCC
TGGAGCGCGC TGGACGAGCC GCTGATGATG GCGTTGCCGC AGACGCACCC GGCCGCCGCG
CAGGCCGTGC TCGAGTGGGC CGACGTGTGT GCCGAGCCGC TGGTGATCTT TCCGCGCCAC
ATCGCGCCGT CGCTGTTCGA CGCGCTGCTG GGCGCCTACC GCGCGCAGGG CGCCACGCCG
CACATCGCGC AGGAGGCGAT CCAGATGCAG ACCATCGTCA ACCTGGTGTC GGCCGGCATG
GGCGTGGCCT GGGTGCCCGA GTCGGTGACG CGGCTGCAGC GCCCGGGCGT GGTCTACCGG
CCGGTGCGGG GCCTGGCGCT GCGCTGCGAG ACCAGCCTGA TCTGGCGCGA GCCGGCCTCG
CCGGTGGTGG CGCGCTTCGT CGGCCATGTG TCCGCGGATG TCATGGCCGA GCGGCGACAA
TCCGCCTCCG CCGGGGCTGC CCGGTAG
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| Protein sequence | MIDLRLWRQF LTLADELHFG RAAQRLHMTQ PPLSQAIQGL ERELGVALFL RTRRSVALTP
AGAALLPPVR RLLAAAEELP RIAQAAAAGL AGQLRLAFIS SISYGPLPEW LRSFREAHPE
VALTLREATL DVQLAAFDAD EIDAGFVLHA PGAAPPSFAA WSALDEPLMM ALPQTHPAAA
QAVLEWADVC AEPLVIFPRH IAPSLFDALL GAYRAQGATP HIAQEAIQMQ TIVNLVSAGM
GVAWVPESVT RLQRPGVVYR PVRGLALRCE TSLIWREPAS PVVARFVGHV SADVMAERRQ
SASAGAAR
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