| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1483 |
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| Symbol | |
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| ID | 6162221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1567078 |
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| End bp | 1569012 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664237 |
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| Product | nitrous-oxide reductase |
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| Protein accession | YP_001790516 |
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| Protein GI | 171058167 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4263] Nitrous oxide reductase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.150565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT CCAGCGATCG CTTCGCCGAC AAATCCGTGG CGCCCAGCCG CCGCAAATTC
CTCAATACCG CCGCCGTGGC AGGCCTGGCC GGTGTGGGCC TGGCGGCGTG CAACGACAAA
TCGGCACCGG CCGCGGGCGC TGCGGCACCC GCCTCGGCCG CAGCGGTCGC GCACGGCAGC
GCCGGCGGCG TGCATCCCAA GCCGGGCGAG CTCGACACCT ACTACGGCCT GTGGAGCGGT
GGCCACACCG GCGACATGCG GGTGCTGGGC ATGCCGTCGG GGCGCGAGCT CACGCGCATC
CCGTGTTTCG TGCCCGACGC GCTGGTCGGC TGGGGCATCA CCAACGAGAG CAAGGCCATC
ATGGGCACCA AGCCCGATGG CAGCCTCAAG TACACGGTGG CCGACACCCA CCACACCCAC
GCCTCCTACA AGGACGGCGA CTACGACGGC CGCTACGCCT GGATCAACGA CAAGATCAAC
AGCCGCATCG CGCGCATCCG GCTCGACTAC TTCACCTGCG ACAAGATCAC CGAGCTGCCC
AACGTGCAGG GCTTCCACGG CATCTTCCCC GACAAGCGCG ACCCGGTCGA CCCGGCCATC
AACTACACCA CCCGCGTATT CTGCGGCGCC GAGTTCCACA TCCCGCTGCC CAACAACGGC
AGCGATCTGG ACAAGCCCGA GGCCTACCGC TCGATGTTCA GCTGTGTCGA CGCCGAGACC
ATGGAAGTGC GCTGGCAGGT GCTGATCGAC GGCAACTGCG ACCTGGCCGC GACCTCGTAC
GACGGCAAGC TCGCGGCCAC CAACCAGTAC AACACCGAGG GCGGCGTGAA GTTCGCCGAC
ATGATGTCGG TCGAGCGTGA CGCCTGCCTG TTCTTCAACG TGGCGCGCAT CGAGCAGGCC
GTCAAAGACG GCAAGTTCAA GACCTACGGC GCCAGCAAGG TGCCGGTGGT GGACGGCACC
CTCAAGTCCA ACGCCGACCC GAAGACCGCG CTGACCGCCT ACGTCAGCGT GCCCAAGAAC
CCGCACGGCG TGAACGCTTC GCCCGACGGC AAGTACTTCA TCTGCGCCGG CAAGCTCTCG
CCCACCGCCA CCGTGATCGA GCTGGCCCGC GTGCTCGACT GGTTCGACGG CAAGCTCGAC
AAGCTTGACG CAGCCATCGT GGCCGAGGTC GAGATCGGCC TGGGCCCCCT GCACACCGCC
TTCGACGGCC GCGGCAACGC CTACACCACG CTGTTCCTCG ACAGCCAGCT GGTGAAGTGG
AACGTCGACG CCGCGATCAA GTTCCACGCC GGCGACAAGA CCGCCAAGTA CGTGGTCGAC
CGCCTCGACC TGCAGTTCCA GCCCGGCCAC GTCAACGCCT CGCAATCCGA GACCAAGAAC
GCCGACGGCA AGTGGCTGGC GGTGGGCTGC AAGTTCTCGA AGGACCGCTT CCTGCCGGTC
GGCCCGCTGC ACCCCGAGAA CGAGCAGATC ATCGACATCT CGGGCGACAA GATGGTGCTG
GCGGCCGATC ACCCGGTGCG CGGCGAGCCG CACGACTTCA TCATCTTCAA GCGCGAACTG
CTGCGCCCGA AGCAGGTCTA CGAGCTCGAC GACTTCCCGA ACGCAATCAA GGACGCGAAG
GATGGCGGCG TCTTCCGCAA CGGCAAGAAG GTCGAGGTGA AGATGACCTC GCAGGCGCCG
ATGTTCAGCC TGACCGAGTT CAAGCTCAAG AAGGGCGACG TGGTGACGCT CACGCTCACC
AATCTCGACA AGATCGAGGA CCTGACGCAC GGCTTCGCGA TCCCGAAGTA CAACGTCAAC
TTCATCGTCA ACCCGCAGGA GACCAAGTCG GTGACCTTCG TGGCCGACCA GCCGGGCGTG
TTCTGGTGCT ACTGCACGCA CTTCTGCCAC GCACTGCACC TCGAGATGCG CTCGCGCATG
ATCGTCGAGG CCTGA
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| Protein sequence | MTDSSDRFAD KSVAPSRRKF LNTAAVAGLA GVGLAACNDK SAPAAGAAAP ASAAAVAHGS
AGGVHPKPGE LDTYYGLWSG GHTGDMRVLG MPSGRELTRI PCFVPDALVG WGITNESKAI
MGTKPDGSLK YTVADTHHTH ASYKDGDYDG RYAWINDKIN SRIARIRLDY FTCDKITELP
NVQGFHGIFP DKRDPVDPAI NYTTRVFCGA EFHIPLPNNG SDLDKPEAYR SMFSCVDAET
MEVRWQVLID GNCDLAATSY DGKLAATNQY NTEGGVKFAD MMSVERDACL FFNVARIEQA
VKDGKFKTYG ASKVPVVDGT LKSNADPKTA LTAYVSVPKN PHGVNASPDG KYFICAGKLS
PTATVIELAR VLDWFDGKLD KLDAAIVAEV EIGLGPLHTA FDGRGNAYTT LFLDSQLVKW
NVDAAIKFHA GDKTAKYVVD RLDLQFQPGH VNASQSETKN ADGKWLAVGC KFSKDRFLPV
GPLHPENEQI IDISGDKMVL AADHPVRGEP HDFIIFKREL LRPKQVYELD DFPNAIKDAK
DGGVFRNGKK VEVKMTSQAP MFSLTEFKLK KGDVVTLTLT NLDKIEDLTH GFAIPKYNVN
FIVNPQETKS VTFVADQPGV FWCYCTHFCH ALHLEMRSRM IVEA
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