| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1480 |
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| Symbol | |
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| ID | 6162015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1562070 |
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| End bp | 1563086 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664234 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790513 |
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| Protein GI | 171058164 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.132633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTG AATGGAATCT GGCGCCCGCC GCACAGCCTG AATCGAACCC GTCGATGCCG
AACGAATCCG CGATCGACCA CCGCGCCAGC GCCATCACGC TGCGCGGCGT CAGCAAGCAT
TACGGCGCGC TGCGGGCGGT CGACGGCGTG GATCTCGACG TGCGGCGCGG CGAGGTCTTC
GGCCTGATCG GCCACAACGG CGCGGGCAAG AGCACGCTGT TCAAGATGAT GCTCGGGCTG
GTGCTGCCGA GTGCCGGCCA GATCGAGGTG GCGGGCTCGC CGGTGAGTGG CAAGGGCTTT
CGCGCCGTGC GCCGGCAGAT GGGCTACCTG CCCGAGAACG TGGTGTTGTG GGACAACCTC
GACGGCCTGG AGACGATGCA CTTCTTCGCC CGCCTGAAGG GCGCGCCGCT CGCCGACTGC
CCCGCCCTGC TCGACCGTGT CGGCCTCACG CACGCCGGCA AGCGGCCGGT GCGCGAGTAC
TCGAAAGGCA TGCGCCAGCG GCTCGGTTTT GCGCAGGCGC TGCTCGGCTC GCCGCAGGTG
CTGTTTCTCG ATGAACCCAC CACCGGCCTC GACCCGCACG CGATCCGCCA GTTCTACGAC
ACCCTCGCCG AGCTGCGTCA ACAGGGCGTG ACGATGGTCA TCAGCTCGCA CATCCTGGCC
GAACTGCAGG CGCGGGTCGA CCGGCTCGCG GTGCTCGCCA GCGGGCGCGT GCAGGCGCTG
GGCAGCGTGC AGCAGCTGCG TGAACAGCAT GACCTGCCGC TGGCCGTGAC ACTGCGGCTG
GCCCCCGCCG ACGTGGCCGC GGCCGAGCAG GCGCTGGCGC GGCTGCCGGC GCTGCTGGTC
GGTGAACGCG GCCTGGCCAT CGAACACGTG GCCGACGGCC TGCAACTGAG CTGCCCGCGG
CTGGCCAAGA TGGCCTTGCT GCAGGTATTG GCGCCGCTGG GCGCGCGGCT GATCGACGTG
CAGATCACCG AGCCGTCGCT CGAAGATCTG TTCTTCAGCA CCGAGGAGCA ACGTTGA
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| Protein sequence | MRAEWNLAPA AQPESNPSMP NESAIDHRAS AITLRGVSKH YGALRAVDGV DLDVRRGEVF
GLIGHNGAGK STLFKMMLGL VLPSAGQIEV AGSPVSGKGF RAVRRQMGYL PENVVLWDNL
DGLETMHFFA RLKGAPLADC PALLDRVGLT HAGKRPVREY SKGMRQRLGF AQALLGSPQV
LFLDEPTTGL DPHAIRQFYD TLAELRQQGV TMVISSHILA ELQARVDRLA VLASGRVQAL
GSVQQLREQH DLPLAVTLRL APADVAAAEQ ALARLPALLV GERGLAIEHV ADGLQLSCPR
LAKMALLQVL APLGARLIDV QITEPSLEDL FFSTEEQR
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