Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1477 |
Symbol | |
ID | 6162012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1559210 |
End bp | 1560655 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664231 |
Product | cytochrome c oxidase accessory protein CcoG |
Protein accession | YP_001790510 |
Protein GI | 171058161 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0811097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CGCCCAAACG CCCGATCATC CCGATCCAGC CCGCCAGCAC GGCCCTCTAC GCGGCCGAGG CCAAGATCTA CGCGCGCTCG GTCAGCGGCT ACTTTGCCAA CTGGCGCTGG GTGATGGTGT GGTTCACGCA GCTGGTGTTC TACGGCGGCG CGTGGCTGCA GTGGAACGGC CGCCAGGCGC TGCTGTTCGA TCTGGGCGAG CGGCGCTTCT ACGTGCTCGG GCTGGTGCTG CATCCGCAGG ATTTCATCTA CCTGGCCGCG CTGCTGGTGA TCAGCGCGCT GGGGCTGTTC TTCTTCACCG CGGTGGCCGG GCGGCTGTGG TGCGGCTACA CCTGCCCGCA GACGGTCTAC ACCGAGATGT TCATGTGGAT CGAGCGCCAC ATCGAGGGCG ATCGCCTGGC CCGCATGCGG CTCGACGAGT CGCCCTGGAA CACCCGCAAG CTGCTGCGCA AGGGCGGCAA ACACGCGGCC TGGCTGGCGC TGGCGCTGGT CACGGGTTTC AGCTTCGTCG GCTATTTCGT ACCGGTGCGC GAGCTGGCGC AATCGGTGGC GTCGCTGGAC GTGTCGGCGT GGGAAGGTTT TTGGGTGCTG TTCTACGCCC TGGCCACCTA CGGCAACGCC GGCTTCATGC GCGAGCAGGT GTGCAAGTAC ATGTGCCCGT ACGCGCGTTT CCAGAGCGCG CTGATCGACC GCGATTCGAT GGTCATCGCC TACGACAGCG GCCGCGGTGA GCCACGTGGC TCACGCTCGA AGAAGGCCGA CCTGGCCACG CTGGGCCTGG GCAGTTGCGT CGACTGCACG ATGTGCGTGC AGGTCTGCCC GACCGGCATC GACATCCGCA ATGGTCTGCA GAACGAATGC ATCGGCTGCG CCGCCTGCAT CGACGTTTGC GACGACGTGA TGGACAAGAT GGGCTACGCG CGCGGCCTGA TCCGCTACGC CACCGAAAAC GGCGTGGCCG GCCAGTGGAA CCGCGCGCAG ATGCTGCGCC GCCTGTGGCG CCCGCGGGTG CTGATCTACG GCACGCTGCT GCTGGCGGCG AGCGGCACCT TCGTCGCCAG CCTGGCCGGC CGCGACGCCT TCCAGATCGA CGTCATCAAG GACCGCGGCG TGCTCGCGCG GGTGGTCGAC GACGGCATGA TCGAGAACGT CTACCGCCTG CAGCTGATGA ACAACCGCGA GCAGCCGCAA CGCCTGCGCC TGCGGGTGGA CGGCCCGGCC GGCCTGCGCC TGGCCGGCGG CGGCACCGAG CTGACCCTGC CGGCGACCGG CCTCGGCCAG CAGGTCGTCA GCGTGCACCT GCCGCCCGAG GCGGCGCAGG CGCTGCGCGG CAGTGCGGTG CCGATCCGCT TCGTGATCGA AGGCCGGCCG CTCGCCGAGC CCGGCGCCGC GCCCGAGGTG GTGCGCGAGG CTTCGACCTT CTACGTGCCG CGCTGA
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Protein sequence | MSTPPKRPII PIQPASTALY AAEAKIYARS VSGYFANWRW VMVWFTQLVF YGGAWLQWNG RQALLFDLGE RRFYVLGLVL HPQDFIYLAA LLVISALGLF FFTAVAGRLW CGYTCPQTVY TEMFMWIERH IEGDRLARMR LDESPWNTRK LLRKGGKHAA WLALALVTGF SFVGYFVPVR ELAQSVASLD VSAWEGFWVL FYALATYGNA GFMREQVCKY MCPYARFQSA LIDRDSMVIA YDSGRGEPRG SRSKKADLAT LGLGSCVDCT MCVQVCPTGI DIRNGLQNEC IGCAACIDVC DDVMDKMGYA RGLIRYATEN GVAGQWNRAQ MLRRLWRPRV LIYGTLLLAA SGTFVASLAG RDAFQIDVIK DRGVLARVVD DGMIENVYRL QLMNNREQPQ RLRLRVDGPA GLRLAGGGTE LTLPATGLGQ QVVSVHLPPE AAQALRGSAV PIRFVIEGRP LAEPGAAPEV VREASTFYVP R
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