Gene Lcho_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1474 
Symbol 
ID6161579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1557224 
End bp1557493 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content69% 
IMG OID641664228 
Producthypothetical protein 
Protein accessionYP_001790507 
Protein GI171058158 
COG category[S] Function unknown 
COG ID[COG4309] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0782723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC TTGCCACCCG CATCGATGTG CGCGAGATCG CGCCGAGCGA GCGCCACGCC 
ACGATCTTCG CCACCTTCCA GGGGCTGGCG CCGGGTGAGT CGTTCGAGCT CGTCACCGAT
CACGAGCCGG TGCCGCTGGC GATGCAGTTC CAGATCGAGT GGCCCGGCCA GTTCGACTGG
CAGGTGATCG AGGCAGGCCC GGTCGAGTGG TGCGTGCGCA TCGTCCGCCA GGCCGCGCGC
AAGAGCTGCT GCGGTTGCTG CGGCGGCTGA
 
Protein sequence
MTQLATRIDV REIAPSERHA TIFATFQGLA PGESFELVTD HEPVPLAMQF QIEWPGQFDW 
QVIEAGPVEW CVRIVRQAAR KSCCGCCGG