Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1474 |
Symbol | |
ID | 6161579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1557224 |
End bp | 1557493 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664228 |
Product | hypothetical protein |
Protein accession | YP_001790507 |
Protein GI | 171058158 |
COG category | [S] Function unknown |
COG ID | [COG4309] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0782723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC TTGCCACCCG CATCGATGTG CGCGAGATCG CGCCGAGCGA GCGCCACGCC ACGATCTTCG CCACCTTCCA GGGGCTGGCG CCGGGTGAGT CGTTCGAGCT CGTCACCGAT CACGAGCCGG TGCCGCTGGC GATGCAGTTC CAGATCGAGT GGCCCGGCCA GTTCGACTGG CAGGTGATCG AGGCAGGCCC GGTCGAGTGG TGCGTGCGCA TCGTCCGCCA GGCCGCGCGC AAGAGCTGCT GCGGTTGCTG CGGCGGCTGA
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Protein sequence | MTQLATRIDV REIAPSERHA TIFATFQGLA PGESFELVTD HEPVPLAMQF QIEWPGQFDW QVIEAGPVEW CVRIVRQAAR KSCCGCCGG
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