| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1473 |
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| Symbol | |
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| ID | 6161578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1555886 |
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| End bp | 1557058 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664227 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001790506 |
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| Protein GI | 171058157 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3448] CBS-domain-containing membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.103531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC CGCCTCCCGT TCCGGTTCCC CTCGATCGCC TGCGCGCCTG GCTGCGCGCC
CTGCAGCCCG CGCAACTGGC CATCGACGGC CGCGAGCGCC GCCGCGTGGT GGCCGGCGGC
GCGCTGGGCA TCGTGATGGT GGCGCTGCTG TCGCACGCCT GGCCGATCTG GCCCGGCCTG
CCGTGGCTGG TGGCGCCGCT CGGGGCCAGC GCGGTGCTGG TGTTCGGCCT GCCGGCCAGC
CCGCTGGCGC AGCCCTGGTC GGTGGTGGGC GGCAACACGC TGTCGGCGCT GGTGGGCGTG
TCGTGCGTGC ACCTGCTGCC CACGCCCGAA CTGGCGGCGA GCGTGGCGGT GGCCGGTGCC
ATCGCGGTGA TGATGGCGGC GCGCTGCCTG CATCCGCCCG GTGGCGCCGC CGCGCTGCTG
GCGGTGATGA CGGGCATGGG CGACTGGCGC TTCGCACTCG CGCCGGTGGC CCTGAACTCG
GCCCTGCTGG TGGCAGCCGG CATGCTCTAC AACCCGCTGA CCGGTCGGCG CTACCCGCAC
GCCCAGGACG CGGCCTCCAG CCCCGCCAAG CCTGCGGGCG AACGTGCCCC CGGCTTCAGC
GACGCCGATC TCGACGCCGT TCTGGCGCGC TACAACCAGG TGCTCGACAT CCCGCGCGAC
GACCTGCGCA CGCTGCTCGA ACAATCCGAA CTCGAAGCCC ACCGGCGCCG CCTCGACACC
CTGCGCTGCC GCGACATCAT GTCGGCCGAT CCGCTCACCG TCGCCTTCGG CACGCCGCTG
CACGAGGCCT GGCAGCTGCT GCGCGGCCAC CGCATCAAGG CGCTGCCGGT GGTCGATCGC
TACGGCTTCA TCGTCGGCAT CGTGACGCAG GCGGATTTCC TGCGCAGCGC CGAACTCGAT
CACCCCGACG GGCTCGACCG CATCAACACC CGCCTGGGCC GGCTGCTGCG GCCGACGCCC
GGCATCAACT CGGACAAGCC CGAGGTGGTC GGCCAGATCA TGAGCCGCCA GGTGCGCGTG
GCCAGCGCCG AGCGGCCGCT CAATGAACTG GTGCCGCTGT TCTCATCCAC CGGCCACCAC
CACATCCCGA TCATCGGCGA GCGCAACCGG CTGGTGGGCA TCATCACGCA GACCGACCTG
GTCGCCGCCC TGGCACGGCC GGGCGGCGTC TGA
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| Protein sequence | MSQPPPVPVP LDRLRAWLRA LQPAQLAIDG RERRRVVAGG ALGIVMVALL SHAWPIWPGL
PWLVAPLGAS AVLVFGLPAS PLAQPWSVVG GNTLSALVGV SCVHLLPTPE LAASVAVAGA
IAVMMAARCL HPPGGAAALL AVMTGMGDWR FALAPVALNS ALLVAAGMLY NPLTGRRYPH
AQDAASSPAK PAGERAPGFS DADLDAVLAR YNQVLDIPRD DLRTLLEQSE LEAHRRRLDT
LRCRDIMSAD PLTVAFGTPL HEAWQLLRGH RIKALPVVDR YGFIVGIVTQ ADFLRSAELD
HPDGLDRINT RLGRLLRPTP GINSDKPEVV GQIMSRQVRV ASAERPLNEL VPLFSSTGHH
HIPIIGERNR LVGIITQTDL VAALARPGGV
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