| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1465 |
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| Symbol | |
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| ID | 6161540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1547472 |
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| End bp | 1549328 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664219 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001790498 |
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| Protein GI | 171058149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4548] Nitric oxide reductase activation protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.421906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGT GGGTCGGCCA GCAATGGCAT CGTTTCATCA GCCGCGCCGC CGACTGCCAG
CACCCGCAGG CGGCGGTCAG CCTGGCGCAG ATGGAGCGCA GCATCGGCCT GCTGTTTCGC
GCCGGCGGAG GTGCCCGCGC GGTGCGCCTG ACCGGCGCCG CCGACAGCCG TGTCGGCGGC
ACGCGCAGCT GGCTGCAGCG TGTGGCCGGC AGCGGCACGC ATGCGCCGCT GCCGCGGCTC
GAATCCGACG TGCTGGCGCT GCCGCCGACG CTGGCGGTGT TCGACGACAT CGCGCTCAAC
CGCGCGCTCT ACCTGTGGCT GGCCGCACTC GCGTCGGTGA TCGACGGTTA CGGCGAGCAC
AACGGCGATG GCGGCGGCGA CTGGATCGGC AGCAACCTGC TCGCCACCCG CGTCGCGCTG
CACGCCTTTC CCGGGTTGCG GGAACGCCAC GCCCAATTGG TCGAAGCCCA GTTGGCGCTG
CGCCCCGACC TGTCGACGCT GCGCGGCCCG GCCGCTGCCG CCGAGGCCCA GGTGCAGCGC
GCCCTGCGTG GCGAGCGCCT GCACGAAGGC CCGGCCCTGC GCCCGCAGGA CGTGGCGCCG
GTCTGGTTGT GGCTCGACGT GGCCGAGGCG ACACGCGGCG CCGACGCGGT GCGCAATCGC
CCCGATCCCG AATCGAGCGA GCCCGCGCAA CGCCCACCGT CGTCCGGATC GAAGCGCCGC
CGCAAGGCCG AAGCCGTCAG CGACGAGCGC GACAAGGCGC CGCTGATGAT GTTCTTCCGC
GCCGAGTCGA TCCTGTCGTG GGGCGAGTTC ATCAAGGTCA ACCGCGCCAG CGACGACGAC
GAGGATCCGC AGGCCCAGGC CGTGGCCGAC GACATGGACG TGCTGGCGAT CGCGCCCGAT
GGCCGCAGCG CGGCATCGCG CGTCAAGTTC GACCTCGACC TGCCCAGCGC CGCCGCCGAC
GACCGCCCGC TCGGCCCCGG CCTGCGCCTG CCCGAGTGGG ACTGGAAACG CGCCCGCCTG
CTGCCCGAGC ACTGCGCGCT GCAGACGCTG ATCAGCACGC CGGCCAAGCC CTTCGTGCCA
CCACCGGCCT TGCGCGCCAC CGCGCGGCGC ATCCGCCGGC GCATGGAGGT GCTGCGCGCC
GGGCTGGGCC GCGAACGGGG CCGCCCCGAT GGCGACGAGC TGGACCTGGA TGCCTTCGTG
CGCCATCAGG TCGACGCCGC CAGCGCGCCG CACCACGAGC TGCCCGCCGT GTTCTCGCGC
CGCGTGCGCC GCGAGCGCAG CCTGGCCACG CTGCTGCTGG CCGACCTGTC GCTGTCGACC
GACGCGCACG TCGACAACCA CTCGCGCGTG ATCGACGTGA TCCGCGATGC GCTCTACGTC
TTCGGCGAGG CGCTGTCCGC CAGCGGCGAT CCGTTCGAGA TGCTCGGCTT CAGCTCGGTG
CGGCGCCAGA ACGTGCGCAT GCAGCACCTC AAGGGCTTCG ACGAGCCCTG GCGCGGTGGC
GCCTGCGACC GCGTCGGCGC GATCAGGCCG GGCTACTACA CGCGCATGGG CGCGGCCATC
CGCTGCGCCA CGCTGCGCCT GCAGGCGCGC CCCGAACGCC AGCGCCTGCT GCTGATCCTG
ACCGACGGCA AGCCCAACGA CCTCGATGTC TACGAGGGCC GCTACGGCCT GGAGGACACC
CGCCACGCGG TGCAGGCCGC GCGCGACGCC GGCCTGGTGC CGTTCTGCGT CACGATCGAC
GAGACCGCGC ACGACTACCT GCCGATGCTG TTCGGCCAGC GCGGTTATGC GCTGGTGCAC
CGGCCGCAGG ACCTGGTGCA GCGGTTGGCG CAGGTGCATG CGGCGCTGAC GCGCTGA
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| Protein sequence | MEEWVGQQWH RFISRAADCQ HPQAAVSLAQ MERSIGLLFR AGGGARAVRL TGAADSRVGG
TRSWLQRVAG SGTHAPLPRL ESDVLALPPT LAVFDDIALN RALYLWLAAL ASVIDGYGEH
NGDGGGDWIG SNLLATRVAL HAFPGLRERH AQLVEAQLAL RPDLSTLRGP AAAAEAQVQR
ALRGERLHEG PALRPQDVAP VWLWLDVAEA TRGADAVRNR PDPESSEPAQ RPPSSGSKRR
RKAEAVSDER DKAPLMMFFR AESILSWGEF IKVNRASDDD EDPQAQAVAD DMDVLAIAPD
GRSAASRVKF DLDLPSAAAD DRPLGPGLRL PEWDWKRARL LPEHCALQTL ISTPAKPFVP
PPALRATARR IRRRMEVLRA GLGRERGRPD GDELDLDAFV RHQVDAASAP HHELPAVFSR
RVRRERSLAT LLLADLSLST DAHVDNHSRV IDVIRDALYV FGEALSASGD PFEMLGFSSV
RRQNVRMQHL KGFDEPWRGG ACDRVGAIRP GYYTRMGAAI RCATLRLQAR PERQRLLLIL
TDGKPNDLDV YEGRYGLEDT RHAVQAARDA GLVPFCVTID ETAHDYLPML FGQRGYALVH
RPQDLVQRLA QVHAALTR
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