| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1450 |
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| Symbol | |
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| ID | 6161123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1530590 |
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| End bp | 1532167 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664204 |
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| Product | cytochrome d1 heme region |
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| Protein accession | YP_001790483 |
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| Protein GI | 171058134 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.593871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC CTCGTCTTCC GAATCTCTTC GCACTGGCCT GTGTCGCCTT GCTGGGCGGC
CTCGGCACAC CCAGCCTGGC GGTCGATGCG TCGGCGCTGT TCGACCAGCA TTGCGCCGCC
TGCCACGGTG CCCAGCGCAC CGGCAGCATG GGCCCGGCGC TGCTGCCCGA AAGCCTGGAG
CGGCTGCGAC CGGCCGAGGC GAAGAAGGTC ATCACGCAAG GCCGCACCGC CACGCAGATG
CCGGCCTTCG GCGCCACGCT GTCGGCCGAG CAGATCGACG CGCTGGCCGG CTGGATCTAC
CGCCCGGTGA GCCCATCTCC GACTTGGGCC GAGGCCGACA TCCGCGCCTC GCGCGTCGAG
ACGCCCGACG CGCAGGGCCT GCCGAACAAG CCGGTGTGGC GGGCCGACCC GATGAACCTG
TTCGTGGTGG TGGAGGGGGG CGACCATCAC GTGTCGCTGC TCGACGGCGA CCGCTTCGAG
GTCATCCACC GCTTCGCCAG CCGCTACGCG CTGCACGGCG GGCCGAAGTT CACGCCCGAC
GGCCGCTTCG TGTTCTTCGG CTCGCGCGAC GGCTGGATCA CCAAGTACGA CCTCTGGAAC
CTGACCGTGG TGGCCGAGGT GCGCGCCGGC CTGAACATGC GCAACGTGGC AGTCAGCGGC
GACGGCCGCT GGGTGATGGC GGCCAACTAC CTGCCGCGCA AGCTGGCGCT GTTCGATGCC
GATCTGAACC TGGTCAAGAG CTTCGATGCC AGCACGCTCG ACGGCAAGAG CGCCTCGCGC
GTGTCGGCGG TCTACGACGC TGCGCCGCGC AGGAGTTTCG TGGTGGCGAT GAAGGACATC
CCCGAGGTCT GGGAGATCTC CTACGACCCG AAGGCCGAGC CCATCCACGA CGGCTACGTG
CACGACTACA AGATGGGCGA GGCGATCGCC AAGCCCGGTT ATCAGGGCGT GCGGCGCACG
CTGCTCGACG AGCCGCTGGA CGACTTCTTC TTCGACCAGA GCTATCGCCA CGTGCTCGGC
GCGACACGAG CAAAAAGCGA CGGCACGCCG ACCGCGCAGG TCGTCAACCT CGACATCCGC
CAGAAGATCG CCGAACTGCC GATCGCCGGC ATGCCGCACC TGGGCTCGGG CATCACCTTC
GCGTGGGGCG GCACCACCGT GCTGGCGAGC CCCAACTTGA AGGGAGGGGC GATCGACGTG
ATCGACATGA AGACCTGGAA GCCGGTCAAG ACCATCCCGA CGCCCGGCCC GGGCTTCTTC
ATGCGCAGCC ACGAGAACTC GCGTTACGCC TGGACCGATT CGATGATGAG CCCGACCGCC
CGCGACACGC TCACGCTGAT CGACAAGACC ACGCTCGCGC CGGTGGCCAG CGTGCGCGAG
CCGGGCAAGA CGCTGGCGCA CATCGAGTTC ACGAAGGATG GCCGCTACGC GCTGGCCAGC
GTGTGGGAGC TGGACGGCGC GCTGGTCGTC TTCGACGCCG TCACGTTCAA GGAGGTCAAG
CGCCTGCCGA TGAGCAAGCC GGTGGGCAAG TACAACGTCT GGAACAAGAT CAGCCGCTCG
GAAGGCACGT CGCATTGA
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| Protein sequence | MKLPRLPNLF ALACVALLGG LGTPSLAVDA SALFDQHCAA CHGAQRTGSM GPALLPESLE
RLRPAEAKKV ITQGRTATQM PAFGATLSAE QIDALAGWIY RPVSPSPTWA EADIRASRVE
TPDAQGLPNK PVWRADPMNL FVVVEGGDHH VSLLDGDRFE VIHRFASRYA LHGGPKFTPD
GRFVFFGSRD GWITKYDLWN LTVVAEVRAG LNMRNVAVSG DGRWVMAANY LPRKLALFDA
DLNLVKSFDA STLDGKSASR VSAVYDAAPR RSFVVAMKDI PEVWEISYDP KAEPIHDGYV
HDYKMGEAIA KPGYQGVRRT LLDEPLDDFF FDQSYRHVLG ATRAKSDGTP TAQVVNLDIR
QKIAELPIAG MPHLGSGITF AWGGTTVLAS PNLKGGAIDV IDMKTWKPVK TIPTPGPGFF
MRSHENSRYA WTDSMMSPTA RDTLTLIDKT TLAPVASVRE PGKTLAHIEF TKDGRYALAS
VWELDGALVV FDAVTFKEVK RLPMSKPVGK YNVWNKISRS EGTSH
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