Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1448 |
Symbol | |
ID | 6161121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1526145 |
End bp | 1527401 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664202 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001790481 |
Protein GI | 171058132 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGCA TCAGCCAATA CATGCGCGAA CTCGCGCAAG CCCATCGCGG CGGTGTGTAC CCGGCCCCCC GCCGCGCAGC GGCCGGGGGC TCCATGACGG GTCCGGTCGT GATCTGGAAC CTGATCCGGC GCTGCAACCT GACGTGCCAG CACTGCTACG CGCTGTCGGC CGATCACGAA TACAGCGGCG AGCTGTCGGG CGCCGAGGTC GGCACGGTGA TGGACGACCT CAAGGCATTC CACGTGCCGG TGCTGATCCT CTCGGGCGGC GAGCCACTGA TGCGGCCGGA CATCTTCGAG ATCGCCGCAC GCGCCAAGGC GATGCGCTTC TACATCGGCC TGTCGACCAA CGGCACGCTG ATCGACGAGC CGATGGCCGA CCGGGTGGCC GCAGCCGGCT TCGACTACGT CGGCATCAGC CTGGACGGCC TGCGCGAAAC ACACGACAAG TTCCGCCGCC TCGACGGTGC CTTCGACCGC AGCCTGGCCG CCGTGCGGCT GCTGCACGCA CGCGGCGTCA AGGTCGGCCT GCGTTTCACG ATGACGGCGA TGAACGCGCA CGACCTGCCG GCGCTGCTGC AGCTGATGCG CGACGAGCAG GTCGACAAGT TCTACTTCTC GCACCTCAAC TACGCCGGCC GCGGCAACAT CCACCGCGGC CGCGATGCCC AGTTCGCCGC CACCCGCGAG GCGATGGACC TGCTGTTCGA GACCGCCTGG CAGGCTGCGC TGGAAGGTCG GGACGAGGAG TACGTGACCG GCAACAACGA CGCCGACGGG CCGTACCTGC TGCAGTGGGT GGCCGAGCAC CTGCCGCATC TGAGCCCGCT GGTGCACGAG TCGCTGCGCC AGCGGCTGGT GGCCTGGGGC GGCAATTCCA GCGGCGTGAA CGTGGCCAAC ATCGACAACC TCGGCAACGT GCACCCCGAC ACCATGTGGT GGCACCACAC GCTGGGCAAC GTGCGCGAGC GGCCGTTCTC GGCCATCTGG GCCGACACCT CCGACCCGCT GATGGCGGGA CTGAAGGCCA GGCGGCGGCC GGTCGGCGGG CGCTGCGGCG GCTGCGCGCA CTTCGCCATC TGCGGCGGCA ACACCCGCGT GCGCGCCCAG CAGCTCACCG GCAACGCCTG GGCCGAAGAC CCGGGCTGCT ACCTGAGCGA CGCGGAAATC GGCGTGAGCG GCAACGGCGA GCGGGTCAAG GTGACGGCGT TCAGTGGTGG ACGCAAGAGG GTCGGGGTAC CGGTGGTGGC GGGGTGA
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Protein sequence | MFRISQYMRE LAQAHRGGVY PAPRRAAAGG SMTGPVVIWN LIRRCNLTCQ HCYALSADHE YSGELSGAEV GTVMDDLKAF HVPVLILSGG EPLMRPDIFE IAARAKAMRF YIGLSTNGTL IDEPMADRVA AAGFDYVGIS LDGLRETHDK FRRLDGAFDR SLAAVRLLHA RGVKVGLRFT MTAMNAHDLP ALLQLMRDEQ VDKFYFSHLN YAGRGNIHRG RDAQFAATRE AMDLLFETAW QAALEGRDEE YVTGNNDADG PYLLQWVAEH LPHLSPLVHE SLRQRLVAWG GNSSGVNVAN IDNLGNVHPD TMWWHHTLGN VRERPFSAIW ADTSDPLMAG LKARRRPVGG RCGGCAHFAI CGGNTRVRAQ QLTGNAWAED PGCYLSDAEI GVSGNGERVK VTAFSGGRKR VGVPVVAG
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