| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1439 |
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| Symbol | |
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| ID | 6159846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1518314 |
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| End bp | 1519168 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664193 |
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| Product | NmrA family protein |
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| Protein accession | YP_001790472 |
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| Protein GI | 171058123 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCA TCACCGGCGC CACCGGCCAG CTCGGCCGTC TCGTCATCGA ATCCCTGCTC
AAGACCGTGC CCGCCAGCGA GATCGTCGCC GCCGTGCGCA GCCCCGAGAA GGCGCAGGAC
CTGGCCGCGC GCGGCGTGCG GGTGCGCCAG GCCGACTACA ACCAGCCCGC CACGCTCGAC
GCCGCATTCA CCGGCGCACA CAAGCTGCTG CTGATCTCGT CGAGCGAAGT GGGCCAGCGC
GCCCCGCAGC ACCGCACCGT GATCGAGGCG GCGCAGCGTG CAGGCGTCAA GCTGATCGCC
TACACCAGCC TGCTGCACGC CGACAGCTCG CCGCTGGCGC TGGCCGGCGA ACACGTCGAG
ACCGAAGCGA TGCTGCGCGC CTCGGGCCTG CCGTTCGTGC TGCTGCGCAA CGGCTGGTAC
ACCGAGAACT ACGCCGCCTC CGTGCCCGCC GCGCTGGCGC ACGGCGTGGT GCTGGGCAGC
GCCGGGAACG GCCGCATCGC CTCGGCCGCC CGTGCCGACT ACGCCGCGGC CGCAGCCGCC
GTGCTGACCG CCGACAACCC GGCCGGCAAG GTCTACGAGC TGGCCGGCGA CACGTCGTAC
ACGCTGGCCG AACTGGCCGC CGAGATCGCC GCCCAGGCCG ACAAGCCGGT GGCCTACAAC
GACATGCCGC AAGCCGCTTT CGAGGCCGCG CTGCTCGGCT TCGGCCTGCC GGCCGGCCTG
GCATCGCTGC TGGCCGACTC GGACGTAGGC GCCTCCAAGG GCGGCCTGTT CGATGACAGC
CACCAGCTCA GCGCGCTGAT CGGCCGGCCG ACGACACCGA TGGCATCGAC GATCGCGCAG
GCGGTCAAGG GCTGA
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| Protein sequence | MIVITGATGQ LGRLVIESLL KTVPASEIVA AVRSPEKAQD LAARGVRVRQ ADYNQPATLD
AAFTGAHKLL LISSSEVGQR APQHRTVIEA AQRAGVKLIA YTSLLHADSS PLALAGEHVE
TEAMLRASGL PFVLLRNGWY TENYAASVPA ALAHGVVLGS AGNGRIASAA RADYAAAAAA
VLTADNPAGK VYELAGDTSY TLAELAAEIA AQADKPVAYN DMPQAAFEAA LLGFGLPAGL
ASLLADSDVG ASKGGLFDDS HQLSALIGRP TTPMASTIAQ AVKG
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