Gene Lcho_1435 details

Gene Information

• Locus tag: Lcho_1435
• ID: 6159842
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1514852
• End bp: 1515370
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641664189
• Product: co-chaperone Hsc20
• Protein accession: YP_001790468
• Protein GI: 171058119
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.506311
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGGATCG ACGACAACGA CTTCGAGCTG TTCGGCATCG AGGCGAGCTT CTCTCTCGAT 
CGAGCCCGGC TCGACGCACG CTGGAAAGCG CTGCAGGGCG AGGTGCACCC GGATCGTTTC 
GTGGCCGAAG GGGCGGCCGC TCAACGAGTG GCGATGCAAT GGGCGATCCG TGTCAACGAG 
GCCTATCGGC GCCTGAAGGA TCCGCTCCAG CGCGCCGCCT ATCTGTGCGA ACTCAATGGC 
CAGGCGATCG GTGCCGAGAA CAACACCGCG ATGCCGGCCG CCTTCCTGAT GCAGCAGATG 
GCGTGGCGCG AATCGCTCGA CGAGGCCCGC ACGCTGGCCG CTGTCGAAGG ACTGGCCGAC 
CAGGTGGCCG CGCGTCAGCG CACCTTGCTC GACGAGATGG CCGTGCTGAT CGACGAACGC 
CACGACTGGC CCGCCGCCAC CGCACAGGTG CGCGCGCTGA TGTTCATCAC GCGTTTCTCG 
CAGGACGTCG ATCGGCGCCT CGACGCCGAC GGCGCCTGA 

 

Protein sequence

MRIDDNDFEL FGIEASFSLD RARLDARWKA LQGEVHPDRF VAEGAAAQRV AMQWAIRVNE 
AYRRLKDPLQ RAAYLCELNG QAIGAENNTA MPAAFLMQQM AWRESLDEAR TLAAVEGLAD 
QVAARQRTLL DEMAVLIDER HDWPAATAQV RALMFITRFS QDVDRRLDAD GA