Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1430 |
Symbol | nifH |
ID | 6160271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1509709 |
End bp | 1510590 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641664184 |
Product | nitrogenase reductase |
Protein accession | YP_001790463 |
Protein GI | 171058114 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCAC TTCGGCAAAT CGCCTTCTAC GGCAAAGGTG GCATCGGCAA GTCCACCACC TCGCAGAACA CCCTGGCTGC ATTGAGCGAC CTGGGCCAGA AGATCCTCAT CGTCGGCTGT GATCCCAAGG CCGACTCGAC CCGCCTGATC CTGCACGCCA AGGCCCAGGA CACCATCCTG TCGCTGGCCG CCGAGGCCGG TTCGGTCGAG GACCTCGAGC TCGAGGACGT GATGAAGGTC GGCTACAAGG ACATCCGTTG CGTCGAATCC GGTGGCCCGG AGCCGGGTGT CGGTTGCGCC GGCCGCGGCG TGATCACCTC GATCAACTTC CTCGAGGAAA ACGGCGCCTA TGACGGCGTG GACTACGTGT CCTACGACGT GCTCGGCGAC GTGGTGTGCG GTGGTTTTGC CATGCCCATC CGCGAGAACA AGGCGCAGGA GATCTACATC GTGATGTCGG GCGAGATGAT GGCCATGTAC GCGGCCAACA ACATCTCCAA GGGCATCCTG AAGTACGCCA ACTCGGGCGG CGTGCGCCTG GGCGGCCTGG TCTGCAACGA GCGCCAGACC GACAAGGAAC TCGAGCTGGC CGACTCGCTG GCCAAGATGC TCGGCTCCAG GCTGATCCAC TTCGTGCCGC GCGACAACAT CGTTCAACAC GCGGAACTGC GTCGCATGAC GGTGCTCGAG TACGCGCCGG AATCCAAGCA GGCGCAGGAG TACCGCACGC TGGCTTCGAA GATCCACAAC AACGCCGGCA ACGGCACGAT CCCCACCCCC ATCACGATGG ATCAGCTCGA AGACCTGCTG ATGGAGCACG GGATCATGAA GGCGGTCGAC GAAAGCCAGG TCGGCAAGTC GGCTGCCGAA CTCGTCGCCT GA
|
Protein sequence | MAALRQIAFY GKGGIGKSTT SQNTLAALSD LGQKILIVGC DPKADSTRLI LHAKAQDTIL SLAAEAGSVE DLELEDVMKV GYKDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYDGV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL GGLVCNERQT DKELELADSL AKMLGSRLIH FVPRDNIVQH AELRRMTVLE YAPESKQAQE YRTLASKIHN NAGNGTIPTP ITMDQLEDLL MEHGIMKAVD ESQVGKSAAE LVA
|
| |