| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1424 |
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| Symbol | |
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| ID | 6160216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1504573 |
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| End bp | 1506354 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664178 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790457 |
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| Protein GI | 171058108 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC GCCTCGCCGA CCCGTCATCC GCCTACCTGC GCCAGCACGC ACGCGACCCG
GTGGACTGGT ACCCCTGGGG CGAGGAAGCG CTCGCCAAGG CCCGCGCCGA AGACAAGCCC
ATCCTGCTGT CGATCGGCTA CGCCGCCTGC CACTGGTGCC ACGTGATGGC GCGCGAATCG
TTTGCCGACC CGGCCACCGC CGCGCTGATG AACGAAGGTT TCGTCAGCAT CCTGGTCGAC
CGCGAACAGC GCCCCGACCT CGACCAGATC TACCAGCAGG CCCACAGCCT GCTGCGCCGC
AGCGGCGGCG GCTGGCCGCT GAACGTCTTC CTGTCGCCGC AGGGCGTGCC CTTCTACAGC
GGCACCTATT TCCCGGCCGA GGCCAATGAA GGCCAGCAAT CCCTGCGCGA CGTGCTCGGC
TCGGTCGGCA AGGTCTGGCG CGAGCGCCGT GCCGACCTGG CGCGCCAGGA CGCCGCGCTG
CTGGATGCAC TGGCCGAGAC CCTGCCGCGC GCCGACCCGC GCGCCGTGCT CGATGCCCGC
GTGCGCGACC AGGCCTGCGA GCAGCTCGGC AGCGCCTTCG ATGCCGAGAA CGGCGGCTTC
GGCACGGTGC CCAAGTTCGC CCACCCCACC GACCTGGCTT TCCTGCTGCG CCGCGGCCGT
GACGAGGACG ACCCGGCCGC CCTGCACATG GCGCTCGACA CGCTGGCCAA GATGGCCGAA
GGCGGCATCT GCGACCAGAT CGGCGGCGGC TTCTTCCGCT ACAGCGTCGA CGCCCGCTGG
CGCGTGCCGC ACTTCGAGAA GATGCTGTGT GACAACGCCT TGCTGCTGGC GCTCTATGCC
GACGCATTCG CGCTCACCGG CGAGTCGCTG TTTCGCCGCA TGGTCGACGA GACCGCCGGC
TGGGCGCTGC GCGAGATGCA GGCCGCCGAC GGCGGCTTCC ACGCCTCGCT CGCCGCCGAC
GACGCGCAGG GCCGCGAAGG CCGCGTCTAT GTCTGGGAAA GCGAGCCGCT GCGGCTGGCG
CTGTCACCCG ACGAATGGGA TGTCTGCGCC GCCCATTGGG GCCTGGTGGA CGCACCCGAT
TTCGAGGGCA GATACTGGCA GTTGCACGTC GCCCGGCCGG CCGCCGATCT GGCGTTGCTG
CTGCACCGGC CCGAGGAGAT GGTCGAAGAA CTCATCGCCT CGGCCCGCAC CAAGCTGCTG
GCCGCACGCG ACCAGCGCGA ACACCCGGCC CGCAACGAGC AGCAGCTCAC CGCCTGGAAC
GCGCTGATGA TCACCGGCCT GGCGCGCGCC GCCGCGGTCT GCGAGCGCGC CGACTGGATC
GCCGCTGCGC GTCGGGCGCT GGCGCTGATC CGCAGCGAGC GCTGGGTCGA CGGGCGGCTG
CTCGCGATGC CCGGTCAACA CGGCTTTCTC GACGATCACG CCTTCATGCT CGAAGCCGTG
CTGGCCCTGC ATGCCGCCGA CCCGCAGGCC GACGACCTGC CGTTTGCGGT GGCGATTGCC
GAGGCGCTGC TGACGCAATT TGAAGACCCG GCGGACGGCG GTTTCTTCTT CACGCCGCAT
GACGCGCCGG CGCTGATCCA TCGCCCGAAG CCGGGCCTGG ACACCGCCAC GCCGTCAGGC
AACGGCACCG CCGCGCTGGC CCTGCAGGCG CTCGGCCGGC AGGTCAACGA CCCGCGCTAT
TTCGCTGCAG CGAGCCGCTG CGTGCGGGTG TTCGCGGCGC AGGTTCAAAA CGAGCCGGCG
AGTCACACGC GGTTGTTGCA GGCGGCTGCG CTGAACGATT GA
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| Protein sequence | MPNRLADPSS AYLRQHARDP VDWYPWGEEA LAKARAEDKP ILLSIGYAAC HWCHVMARES
FADPATAALM NEGFVSILVD REQRPDLDQI YQQAHSLLRR SGGGWPLNVF LSPQGVPFYS
GTYFPAEANE GQQSLRDVLG SVGKVWRERR ADLARQDAAL LDALAETLPR ADPRAVLDAR
VRDQACEQLG SAFDAENGGF GTVPKFAHPT DLAFLLRRGR DEDDPAALHM ALDTLAKMAE
GGICDQIGGG FFRYSVDARW RVPHFEKMLC DNALLLALYA DAFALTGESL FRRMVDETAG
WALREMQAAD GGFHASLAAD DAQGREGRVY VWESEPLRLA LSPDEWDVCA AHWGLVDAPD
FEGRYWQLHV ARPAADLALL LHRPEEMVEE LIASARTKLL AARDQREHPA RNEQQLTAWN
ALMITGLARA AAVCERADWI AAARRALALI RSERWVDGRL LAMPGQHGFL DDHAFMLEAV
LALHAADPQA DDLPFAVAIA EALLTQFEDP ADGGFFFTPH DAPALIHRPK PGLDTATPSG
NGTAALALQA LGRQVNDPRY FAAASRCVRV FAAQVQNEPA SHTRLLQAAA LND
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