| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1423 |
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| Symbol | |
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| ID | 6160215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1503881 |
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| End bp | 1504300 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664177 |
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| Product | immunoglobulin I-set domain-containing protein |
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| Protein accession | YP_001790456 |
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| Protein GI | 171058107 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGAA CGACCTTTCA AGCCCCCTCC GTCCGTCGCT GGTTGGCGCT TGCCGCCGCG
ACCGTGCTGC TGAGCGCGTG CGGCAGCGAC ACCGCCAAGC CGACCGCCCC GCAAGCCGCC
GTGATCGCGG CCGAAGCCGC GCAGAAGCCG CCGGCGATCA CGGCCCAGCC GCAACCGGCC
ACCGTGGTCA GCGGCGGCAG CGCCAGGTTC AGCGTCACCG CCACCGGCGA GGCGCTGAGC
TATCAATGGC TGAGCAACGG CCAGCCGCTG CCCAAGGCCG ACGGCCCGAG CTTCACCACC
CATGCTGCAT CGATCACCGA TTCGGGCACG CAATACACCG TGCGGATCAG CAACGGCAAC
GGCGAAGTCG TCAGCCAGGC CGCGGTGCTG ACCGTCTCCG AGGCGATGTT CTCGAACTGA
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| Protein sequence | MKRTTFQAPS VRRWLALAAA TVLLSACGSD TAKPTAPQAA VIAAEAAQKP PAITAQPQPA
TVVSGGSARF SVTATGEALS YQWLSNGQPL PKADGPSFTT HAASITDSGT QYTVRISNGN
GEVVSQAAVL TVSEAMFSN
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