Gene Lcho_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1422 
Symbol 
ID6160108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1503483 
End bp1503794 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content71% 
IMG OID641664176 
Producthypothetical protein 
Protein accessionYP_001790455 
Protein GI171058106 
COG category[S] Function unknown 
COG ID[COG4628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGC CCTCCCCACC CACGAAACAA CCCCGCAATC CGCTGCACGG CCTGACGCTG 
GAGAACATCG TCAGCGCGCT GGTGGCGCAG TACGGCTGGG CCGGCCTGGG CGAGCGCGTG
CCGGTGCGCT GCTTCATCAG CGAGCCCAGC ATCGCGTCGA GCCTCAAGTT CCTGCGCAAG
ACGCCGTGGG CGCGCGAGAA GGTCGAGAGC CTCTACCTCT ACATGCTGCG CGACGTGCGC
CGCGAGGCGG CCTTCCGGCC GGCGGCGTCG ACGGTCACGC CCGCCCAGGT GCCGCCGGAC
ACGTCGACCT GA
 
Protein sequence
MQAPSPPTKQ PRNPLHGLTL ENIVSALVAQ YGWAGLGERV PVRCFISEPS IASSLKFLRK 
TPWAREKVES LYLYMLRDVR REAAFRPAAS TVTPAQVPPD TST