| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1415 |
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| Symbol | |
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| ID | 6160056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1497828 |
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| End bp | 1499033 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664169 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001790448 |
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| Protein GI | 171058099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCC TGCCTGCCGA ACCGATGGAC GAGACGGTCG AAGAAGAGAG CTTCGACCTG
CCCGACGACT GGCTGCTGCT GTCCGACCCC GACATCACCG AGGTCGAGTC CGAGCTGGTG
CAGGCGGCGT TGCGCGAGCC GCGGCTGGCG GCCGGGCCGA TGGTCGAGCA CTTCGAGAAG
CAGTTCGCTG CCTGGTTGGG CCGCAAGCAC GCGGTGGCGG TGGCCAGCGG CACGATCGGC
ACCTGGCTCG CGTTGCGGGC GATGGGCATC GGCTCCGGCG ACGAGGTGAT CGCTTCGCCC
TACGGCTGGT ATCAGGTGGC TCATGCCGTG AGCCTGACCG GCGCGAAGGT GGTGTTTGCC
GACATCAACT ACTGGACCGG CTGCCTCGAC CCGGTGCGCA CCGCATCGCA GATCACCGAC
CGGACCCGCG CCATCCTGGC CGGCAACGTC AACGGCCACC CGGCCGCCTG GCATGCGTTT
CGTGCGCTGG CGCGTGATCG CGGCCTGAAG CTGATCGAGG ATTCGACCGA GGCGATCGGC
TCGCGTTATG CCGGCGCGAT GGTCGGCAGC TTCGGCGACG CGGCGGTGTT CGACTTCTCG
CAACCCTCGG CGCTGTGCTG CGGCGAGGGC GGCATGATCG TCACCGACGA CGATGCCCTG
GCGATGGAGC TGCGCTACCT GCGCGCCCGC TCGATCCGTG ACCGGCGTTC GGTGTCGGTG
GGCTCGCGCG TGCCGCTGCA GGCCTCGATC AGCGAGCTGA CCGCCGCGCT CGGCGCCGGC
CAGCTGGTGC GCATCGATCA GATCCTGGCG CAGCGCAAGC AGGTCGAGGC GTATTACATC
GAGCAGATGC AGAGCTTCGA AGGCATCAAG CCGCCCTACG TGGCGACCGA TGTCGAAGAG
GTGCACTGGA TGGTCTACAC CGTGCACCTG GGCAAGCGTT TCACGGTGAG CGCCTGCGAG
CAGATCATCG AGGACATGGC GGCCGAATCC ATCGAGGCCG TCCTCTACTG CCAGCCGCTG
CACCAGCAGT TCCATTACAT CCAGCAGGGC TACAAGCGCG GCCAGTTTCC GCTGGTCGAG
CGCATCGCCG ATCGCGCGCT GGCGCTGCCT TTCCACACCC ATCTCGAAGC CGACCACGTG
AAGTTCATCG TCAAGACGAT GAAGGACAGC TCGGTCAACG TCGGCGCGGG TGCGGCCATC
TACTGA
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| Protein sequence | MSSLPAEPMD ETVEEESFDL PDDWLLLSDP DITEVESELV QAALREPRLA AGPMVEHFEK
QFAAWLGRKH AVAVASGTIG TWLALRAMGI GSGDEVIASP YGWYQVAHAV SLTGAKVVFA
DINYWTGCLD PVRTASQITD RTRAILAGNV NGHPAAWHAF RALARDRGLK LIEDSTEAIG
SRYAGAMVGS FGDAAVFDFS QPSALCCGEG GMIVTDDDAL AMELRYLRAR SIRDRRSVSV
GSRVPLQASI SELTAALGAG QLVRIDQILA QRKQVEAYYI EQMQSFEGIK PPYVATDVEE
VHWMVYTVHL GKRFTVSACE QIIEDMAAES IEAVLYCQPL HQQFHYIQQG YKRGQFPLVE
RIADRALALP FHTHLEADHV KFIVKTMKDS SVNVGAGAAI Y
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