| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1404 |
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| Symbol | |
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| ID | 6160025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1491299 |
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| End bp | 1492888 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664158 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_001790437 |
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| Protein GI | 171058088 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG CCACCGCCTT CGTCAACATC GCGGACCTGC GCAAGGGTCG CCAGGCGCTG
AGCGAAGTTG TCGATGTTCC TGAAACCGGC GGGGGCTGCG GCACCAGCGG CGGTGAGGGC
AAGGCCAGTT GCGGCACCTC CGCCGGCCCC GACGACATGC CCGCCGAGAT CTGGAACAAG
GTCAAGAACC ACCCGTGCTA TTCGGAAGAG GCGCATCACC ACTACGCCCG CATGCACGTG
GCCGTGGCGC CGGCCTGCAA CATCCAGTGC AACTACTGCA ATCGCAAATA CGACTGCAGC
AATGAGTCGC GCCCGGGGGT GGTGAGCCAG AAGCTCACGC CCGAACAGGC CGTCAAGAAG
GTCGTGGCGG TGGCCAGCGA GATCCCGCAG ATGACGGTGC TCGGCATTGC CGGCCCGGGC
GATGCGCTGG CGAACCCGAA GAAGACCTTC GACACCTTCC GCATGCTGCA GGAGCAGGCG
CCCGACATCA AGCTGTGTCT CTCGACCAAT GGCCTGGCAT TGCCGGCGCT GGTCGACGAG
ATCTGCAAGT ACAACATCGA CCACGTCACG ATCACCATCA ACATGGTCGA TCCGGAGGTG
GGTGCGAAGA TCTATCCGTG GATCTTCTGG GATCACAAGC GCGTGACCGG TGTCGAGGCC
GCGCGCATCC TGCACGAGAA CCAGATGCTC GGTCTGGAGA TGCTCACCGC GCGCGGCGTG
CTCACCAAGA TCAACTCGGT GCTGATCCCC GGCATCAACG ACGAGCACCT GATCGAGGTG
AACCGCGAGG TCAAGAAGCG AGGTGCCTTC CTGCACAACA TCATGCCGCT GATCAGCGAA
GCCGAACACG GCACCGTGTT CGGGCTGACC GGCCAGCGCG GCCCGAGCGC GCAGGAGCTG
AAGGCCGTGC AGGACGCGTG CATGGGCGGC GCCAACCTGA TGCGCCATTG CCGCCAGTGC
CGCGCTGATG CAGTGGGCCT GCTGGGCGAA GACCGCTCGG AAGAGTTCAC GCTCGACAAG
ATCGAAGAGA TGGAAGTGGT CTACGACCTC GACAAGCGCA GGAGCTACCA GGACAAGGTC
GAGACCGAGC GCCAGGCCCA GCATGCGGCC AAGCTCGCCG CGCTGGCATC GAGCAACACC
GACGACGGTG TCGACCCGGG CATGAAGGTG CTGGTGGCTG TGGCCACCGA AGGCCACGGC
AAGGTCAACC TGCACTTCGG CCACGCCACC GAGTTCCAGA TCTTCGAGGT GAGCCAGGGC
GAGGCCCTGT TCGTCGGCCA TCGCCGCGTC GACCTCTATT GCCAGGGCGG CTACGGCGAA
GAAGAAGCGC TGCCGTCGGT GGTCAATGCC ATCAACGACT GCCACGCCGT GCTGGTGTCC
AAGATCGGCG CCTGCCCGCG CGATGAACTG AGCGCCGCCG GCATCGAGCC GGTGGACGAA
TACGCGCACG AGTTCATCGA GAAGGCCGCG CTCTCGTGGT TCGGCCGCTA CCGCGAACGC
ATTGCCAGCG GCGCCATCAC GCATCAGCCG CGCGGCGACG CCCGCATCCG CCAGGGCGCC
TACACCTCGG GCGCCGAACA CGCTGCCTGA
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| Protein sequence | MSQATAFVNI ADLRKGRQAL SEVVDVPETG GGCGTSGGEG KASCGTSAGP DDMPAEIWNK
VKNHPCYSEE AHHHYARMHV AVAPACNIQC NYCNRKYDCS NESRPGVVSQ KLTPEQAVKK
VVAVASEIPQ MTVLGIAGPG DALANPKKTF DTFRMLQEQA PDIKLCLSTN GLALPALVDE
ICKYNIDHVT ITINMVDPEV GAKIYPWIFW DHKRVTGVEA ARILHENQML GLEMLTARGV
LTKINSVLIP GINDEHLIEV NREVKKRGAF LHNIMPLISE AEHGTVFGLT GQRGPSAQEL
KAVQDACMGG ANLMRHCRQC RADAVGLLGE DRSEEFTLDK IEEMEVVYDL DKRRSYQDKV
ETERQAQHAA KLAALASSNT DDGVDPGMKV LVAVATEGHG KVNLHFGHAT EFQIFEVSQG
EALFVGHRRV DLYCQGGYGE EEALPSVVNA INDCHAVLVS KIGACPRDEL SAAGIEPVDE
YAHEFIEKAA LSWFGRYRER IASGAITHQP RGDARIRQGA YTSGAEHAA
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