Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1396 |
Symbol | |
ID | 6159921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1483684 |
End bp | 1484163 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664150 |
Product | acetyltransferase |
Protein accession | YP_001790429 |
Protein GI | 171058080 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATAG CCGAGAGCGT GAAGCTGGGA TCGAACGTCA CGGTCATGCA TCCGACGTTG GTGAACCTGT ACGGATGCAC GGTCGGCGAC GACACGCGCA TCGGCGCTTT CGTCGAGATC CAGAAGGGCG CCACGGTCGG GGCGCGTTGC AAGATCTCGT CGCACTCGTT CATCTGCGAA GGCGTGCGCA TCGACGATGA AGTCTTCATC GGCCACGGCG TCATGTTCAC CAATGACGCC CGTCCACGCG CCACCAATGC CGACGGCCAG TTGCAGTCGG CGGCCGATTG GCAGCTCGAA TGCACGCACG TCGGGCGCTG CGCCTCGATC GGCAGCGGCG CGACCATCCT GTCAGGCCTG ACGATCGGCG AAGGCGCGAT GGTCGGGGCC GGTGCGGTGG TCACCCGCGA TGTCCCCGAT CACGCGATCG TGGCCGGCGT GCCGGCGCGC GTGATCGGCG ATGCTCGCAC CCGCCGCTGA
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Protein sequence | MPIAESVKLG SNVTVMHPTL VNLYGCTVGD DTRIGAFVEI QKGATVGARC KISSHSFICE GVRIDDEVFI GHGVMFTNDA RPRATNADGQ LQSAADWQLE CTHVGRCASI GSGATILSGL TIGEGAMVGA GAVVTRDVPD HAIVAGVPAR VIGDARTRR
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