Gene Lcho_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1396 
Symbol 
ID6159921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1483684 
End bp1484163 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID641664150 
Productacetyltransferase 
Protein accessionYP_001790429 
Protein GI171058080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATAG CCGAGAGCGT GAAGCTGGGA TCGAACGTCA CGGTCATGCA TCCGACGTTG 
GTGAACCTGT ACGGATGCAC GGTCGGCGAC GACACGCGCA TCGGCGCTTT CGTCGAGATC
CAGAAGGGCG CCACGGTCGG GGCGCGTTGC AAGATCTCGT CGCACTCGTT CATCTGCGAA
GGCGTGCGCA TCGACGATGA AGTCTTCATC GGCCACGGCG TCATGTTCAC CAATGACGCC
CGTCCACGCG CCACCAATGC CGACGGCCAG TTGCAGTCGG CGGCCGATTG GCAGCTCGAA
TGCACGCACG TCGGGCGCTG CGCCTCGATC GGCAGCGGCG CGACCATCCT GTCAGGCCTG
ACGATCGGCG AAGGCGCGAT GGTCGGGGCC GGTGCGGTGG TCACCCGCGA TGTCCCCGAT
CACGCGATCG TGGCCGGCGT GCCGGCGCGC GTGATCGGCG ATGCTCGCAC CCGCCGCTGA
 
Protein sequence
MPIAESVKLG SNVTVMHPTL VNLYGCTVGD DTRIGAFVEI QKGATVGARC KISSHSFICE 
GVRIDDEVFI GHGVMFTNDA RPRATNADGQ LQSAADWQLE CTHVGRCASI GSGATILSGL
TIGEGAMVGA GAVVTRDVPD HAIVAGVPAR VIGDARTRR