| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1393 |
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| Symbol | |
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| ID | 6159918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1480100 |
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| End bp | 1481278 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664147 |
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| Product | glutamine--scyllo-inositol transaminase |
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| Protein accession | YP_001790426 |
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| Protein GI | 171058077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGG TCGCGATGCC CGTGATGGGT GAAGCCGAAG CCGAGGCCGC CCGGCGCGCC
ATCCTGAGCG GCTGGATCAC GCAGGGGCCG GAGGTGGCGG CGTTCGAGCA GGCGTTTGCC
AGCTACGTGG GTGCGCCGCA CGCCTGCGCG GTGTCGAACT GCACCACTGC CTTGCATCTG
GCGCTGCGGG TGGCGGGTGT GCAGGCCGGT GATGAAGTGA TCACCGTCAG CCACTCCTTC
ATCGCCACCG CCAATGCGGT GCGCTATTGC GGGGCCGTGC CGGTGTTCGT CGACATCGAG
CCCGGCAGCT TCAACCTCGA CCCCGCACGC ATCGAGGCGG CGATCACCGA CCGGACCCGG
GCGATCCTGT GCGTGCATCA GATGGGCCTG CCCTGCGACC TGCAGCGGCT GGTCGAGATC
GGCCACCGGC ACGGCCTGGT GGTGATCGAG GACGCCGCCT GCGCGATCGG CAGCGAGATC
GCCTGGCAGG GCGAATGGCA GCCGATCGGC CGACCGCACG GCGACGTGGC CTGTTTCTCA
TTGCACCCGC GCAAGGTCAT CAGCACCGGC GAGGGCGGCA TGCTGACGAC CCGCCGCGCC
GATTGGGATC GCCAATACCG GCTGCTGCGC CAGCACGCGA TGAGCGTGCC CGACAGCGTG
CGCCACGGTG CCGATCAGGT GATCTTCGAG ACCTACCCGA CGCTGGGCTA CAACTACCGC
ATGACCGACA TCCAGGCCGC CGTCGGCCGG GAGCAGCTCA AGCGGCTGCC GGAGATCGTG
GCCAGGCGGC GCCACCTGGC GGCGCAGTAC GCCCGTCAGC TGGCCGGGAT CGACGGGCTG
GGCATGCCGC AAGAGCCGGC ATGGGCGCGC AGCAACTGGC AGAGCTATTG CGTGCGGCTG
CCGGCGCGCT GCGATCAGCG CGCCGTGATG CAGTCCTTGC TCGATGCCGG CATCAGCACG
CGGCGCGGGA TCATGTGCAG CCACCGTGAG CCGGCCTGCC GCGACGTGGC GCTCACCCAG
CCCCTGCCGC ACTCCGAAGC CGCACAGGAC CACGCCATCC TGCTGCCGCT GTATCCGCAG
TTGACCGCGC AGGATCAGCA GCGCGTGGTG TCGGCACTGG CCCGGGCGTG TGGCGTGTGT
GCCTTGCCCA CGCCCGAGTC GGCACAGCCC GTCGAATGA
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| Protein sequence | MIPVAMPVMG EAEAEAARRA ILSGWITQGP EVAAFEQAFA SYVGAPHACA VSNCTTALHL
ALRVAGVQAG DEVITVSHSF IATANAVRYC GAVPVFVDIE PGSFNLDPAR IEAAITDRTR
AILCVHQMGL PCDLQRLVEI GHRHGLVVIE DAACAIGSEI AWQGEWQPIG RPHGDVACFS
LHPRKVISTG EGGMLTTRRA DWDRQYRLLR QHAMSVPDSV RHGADQVIFE TYPTLGYNYR
MTDIQAAVGR EQLKRLPEIV ARRRHLAAQY ARQLAGIDGL GMPQEPAWAR SNWQSYCVRL
PARCDQRAVM QSLLDAGIST RRGIMCSHRE PACRDVALTQ PLPHSEAAQD HAILLPLYPQ
LTAQDQQRVV SALARACGVC ALPTPESAQP VE
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