Gene Lcho_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1385 
Symbol 
ID6159840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1469641 
End bp1470771 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content68% 
IMG OID641664139 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001790418 
Protein GI171058069 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG CGATGAAACT CCTGATCGTG GCCGGCGCGC GGCCCAACTT CATGAAGGTC 
GCCCCGATCA TCCACGAGGT GCGCAAACGC GCGCTCGATG GCACGCCCGG CCTGCAATAC 
CGGCTGGTGC ACACCGGCCA GCATTACGAC AAGGCGATGT CGAGCATCTT CTTCGAGGAT 
CTCGGCATCC CCGCGCCGGA CATCAACCTC GGTGTCGGCT CGGGCTCGCA TGCGGTGCAG 
ACGGCCAACG TGATGGCGGC TTTCGAGCCG GTGTGCGAGC AGGACCGGCC CGACTGGGTG 
GTCGTGGTCG GCGACGTCAA CTCGACCCTG GCCTGCACGC TGGTGTGCGC CAAGCTGGGC 
ATCAAGGTGG CGCATGTCGA GGCCGGCTTG CGCAGCTTCG ACCGCAGCAT GCCCGAGGAG 
ATCAACCGCA TCGTCACCGA TGCGCTGGCC GATCTGCTGC TCACGCCGTC GATCGACGGC 
GACGCCAATC TGCAGCGCGA GGGCGTACCG GCCGCGAAGA TCCGCTTCGT CGGCAACGTG 
ATGATCGATG CCCTGGTGGC GAACCTCGCG CAGGCGCACG CCTCGCCCCT GCCGGCACGC 
CTGCAGCTCG AACCGCGCGG TTTCGTCTAC GTCACGCTGC ACCGCCCGTC CAACGTCGAC 
GACGCGCCCA GCCTGCGTCA GATCATGGTG GCGCTCAACG TCATCGCGCA GCGCGTGCCG 
GTGGTGTTTC CGGTCCATCC ACGCACCCGG GCGATGCTCG CGCGCTTCGA GATCGCGCCG 
GCCGATGCGG CGGCGATCCG GCTGATCGAG CCGATCGGCT ATCACGACTC GCTGTGGATG 
ACCGAGAACG CGCGCTTCGT GCTGACCGAC TCCGGCGGCA TCCAGGAAGA GTCCACCTAC 
CTGGGCACGC CCTGCCTGAC GCTGCGGCCC AATACCGAGC GGCCGGTCAC GATCGAGGTC 
GGCACCAACC GGCTCACCCG GCTCGATCGC CTGCAGCAGG ATGTGGCGGA GCTGCTGGAA 
GCCCGCCATT CACGTGGCCG GATCCCGACG TTCTGGGACG GCCACACGGC CGAGCGGATC 
GTCGACGCCC TGTTGCAGCA CGCAGAGGCG CCGGCGGCGA GCCTGTCATG A
 
Protein sequence
MNHAMKLLIV AGARPNFMKV APIIHEVRKR ALDGTPGLQY RLVHTGQHYD KAMSSIFFED 
LGIPAPDINL GVGSGSHAVQ TANVMAAFEP VCEQDRPDWV VVVGDVNSTL ACTLVCAKLG 
IKVAHVEAGL RSFDRSMPEE INRIVTDALA DLLLTPSIDG DANLQREGVP AAKIRFVGNV 
MIDALVANLA QAHASPLPAR LQLEPRGFVY VTLHRPSNVD DAPSLRQIMV ALNVIAQRVP 
VVFPVHPRTR AMLARFEIAP ADAAAIRLIE PIGYHDSLWM TENARFVLTD SGGIQEESTY 
LGTPCLTLRP NTERPVTIEV GTNRLTRLDR LQQDVAELLE ARHSRGRIPT FWDGHTAERI 
VDALLQHAEA PAASLS