| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1383 |
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| Symbol | |
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| ID | 6159838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1467294 |
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| End bp | 1468313 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664137 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001790416 |
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| Protein GI | 171058067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGA TCGACATCGT CGTTCCCTGC TACCGCTACG GGCGCTATCT GCGCGACTGC
GTGCACAGCG TCCAGACACA AGGTGCCTGC GACTGGCGTG TCCTGATCCT CGATGACGCA
TCGCCCGACG AAACGCCCGA GGTCGGCGAG GCACTGGCGC GCGAGGATGC ACGCATCACC
TATCGACGCC ATGCCGTCAA CCGCGGGCAC ATCGCCACCT ACAACGAGGG CATCGACTGG
ATCCGCGCCG AGCACATGCT GCTGCTGTCG GCCGACGACC ACCTGCTGCC CGGCGCACTC
GATCGCGCCC TGGCGCTGAT GCAGGCCCAT CCCGACGTGG GCCTGTGTTT CGGCGAGGCG
ATCGAACTGC ACGACGACGG CAGCACGCGC TCGATCCGGG TCGATGTCGA CACCGCCGGC
GAGCCGTCGA TCGTGATAAG CGGTGAGGAT TTCGTGCGCC TGTGCATCGA GGCCGGCGCC
AACAACGTGG TGCCCACGCC CACGGCCATC GTGCGCACGC GCCTGCTCAA GCAGCTCGGC
GGCTATCGCG CCGACCTGCC CCACAGCGGC GACCTGGAAC TGTGGCTGCG ACTGGCCGCC
CACGCGCCGG TCGGATTCGT CAAGGCCGAC CTGGCGGTCT ATCGCCGCCA CTGCGCCAAC
ATGTCGCTCG GTTATGCCCA GGACGAGGGC CTGGCCGACC TGCAGCAACG CCGGCTGGCC
GTCGACGCCT TCGTGCAGAC CTGCCGGCCG GTGCTGGCTT CGGCCGACCG GCTGCACCAG
GCGCTGCTGC AACAGCTCGC GCACCAGGCG GTGCAAGCGG CCAGCAGCGC CTTCAACGAC
AACCGGATGG CGCTGTCGCA GCGCCTGTGC GATCTGGCGG TCAGCGCGTG GCCCGGCGTG
CAGCACGGCG CGCCCTGGCG TGCGCTGGCG TGCAAGCGGC GGATCGGCCT GCGGCTGTCG
GGCGCCTTGC TGCCGGCCGT TTCCCGCATC CGCGCGGTCA CGGCCTGGAT ACGCCACTGA
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| Protein sequence | MNSIDIVVPC YRYGRYLRDC VHSVQTQGAC DWRVLILDDA SPDETPEVGE ALAREDARIT
YRRHAVNRGH IATYNEGIDW IRAEHMLLLS ADDHLLPGAL DRALALMQAH PDVGLCFGEA
IELHDDGSTR SIRVDVDTAG EPSIVISGED FVRLCIEAGA NNVVPTPTAI VRTRLLKQLG
GYRADLPHSG DLELWLRLAA HAPVGFVKAD LAVYRRHCAN MSLGYAQDEG LADLQQRRLA
VDAFVQTCRP VLASADRLHQ ALLQQLAHQA VQAASSAFND NRMALSQRLC DLAVSAWPGV
QHGAPWRALA CKRRIGLRLS GALLPAVSRI RAVTAWIRH
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