| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1381 |
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| Symbol | |
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| ID | 6159836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1465329 |
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| End bp | 1466309 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664135 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001790414 |
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| Protein GI | 171058065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGA CACCCAGAAT TTCGGTTGTC ATCCCGACCT ACAACCGGGC GTTCTGCCTG
GGCCTGGCCA TCGACAGCGT CCTGCAGCAG AGCCTGCCTG CGCACGAGAT CATCGTGGTC
GATGACGGCT CGACCGACCG CACCGACCAG GTCATGCGCG CCTACGCGGG TCGGGTCAGA
TGGGTCTTCC AGCCCAATGC CGGCGTGAGT GCAGCCCGGA ACACCGGCCT GGGTCTGGCA
CAAGGCGACT GGATCGCCTT CCTGGACTCC GACGACGAAT GGCACCCCGA TCGATTGAAG
ATCCAATGCG CGGACATGCA GGCCCATCCG CAGGCCATCG CGCACATGCT CGACTGCACC
GTGGAGGAGA AGAACGGCGC GCAGCGTTCG ATCTTCGAGG TACGCGGCCT GGTCGACGAG
TTCCGCCGTC AGCCCCTCAG ACCGCGGCCG CTGTGCGACG TCCTGGAGTC GGCGTTCTTC
CCCTCCGCGT GGCTGATCGC CCGCCAGGCG ATCGACGCGG CAGGTGGCTT CGACGTGTCG
ATGCGGGTCT GCGAAGACAC CGACCTGTTG AGCCGGATCG CGCTGCAAGG GCCCTTCTTC
GTCAACTGTT TTGCCGGCAC CAAGCTGCAG CGCCTGGGCG ACGGCGGCGG GCTTTCAGAG
CTGTATGTGC ACGCGAGGCT GGAATACCTT GAAAACATCC TGAAGACCTA CCGGCATCTG
GCCGGCTGTC ATCGGCTCAA CGGCCCGGAA CGGCTTTATG TCCGAAGGGA ATACGCTGCC
ACCCATGTGG CCATCGCCTT GCAGCATCGG CTGAACGGTG ATTCGACGGC CTCGATCCGA
TCCCTGATCG CGTCGGTCCA GGTCCATCCG ACCCTGTTCT CGGCGCTCAA GGCCCTCACC
CTCGCCTGTG TCGGCGCGCG CGGATTCGAG GCCATGCGAA CCCTGCGGCA CGTCAACGGC
AACAGCTATC GGCGCGCATG A
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| Protein sequence | MTSTPRISVV IPTYNRAFCL GLAIDSVLQQ SLPAHEIIVV DDGSTDRTDQ VMRAYAGRVR
WVFQPNAGVS AARNTGLGLA QGDWIAFLDS DDEWHPDRLK IQCADMQAHP QAIAHMLDCT
VEEKNGAQRS IFEVRGLVDE FRRQPLRPRP LCDVLESAFF PSAWLIARQA IDAAGGFDVS
MRVCEDTDLL SRIALQGPFF VNCFAGTKLQ RLGDGGGLSE LYVHARLEYL ENILKTYRHL
AGCHRLNGPE RLYVRREYAA THVAIALQHR LNGDSTASIR SLIASVQVHP TLFSALKALT
LACVGARGFE AMRTLRHVNG NSYRRA
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