Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1379 |
Symbol | |
ID | 6159761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1463222 |
End bp | 1464553 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641664133 |
Product | hypothetical protein |
Protein accession | YP_001790412 |
Protein GI | 171058063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCT TCACCCAGCT ATTGGCCCTG GTCATCCTGT TTGCCGCCCA GTCGGCGATC GCCAAGAACA ACTACGTCAG AGCCGGCGCC ACCGGTGCCA ACAACGGCAG CGACTGGACC AACGCCTACG CGTCGCTGCC GGCCACGCTG GTGCGCGGCG ACACCTACTA CATCGCCGAC GGCAGCTACG CCGGCCGCAC GTTCTCGACG CCGGTCAGCG GCACCACGCC CATCATCATC AAGAAGGCGA CGCTGGCCGA TCACGGCATC GCGACCGGCT GGAGCGATTC ATATGGCGAC GGTCAGGCCG CCTTCACCAG CGGACTGGTC TTCACCTCGT CGTACTGGAC CCTCGACGGC CAGACCGGCG GTGGCGCCGT CAACAGCTGG GTGCAGAACT TCGGCTTCAA GATCACCGAG ACCCGCGACG GCAACGCCGT CATCAAGATC GGCCAGGGGG TCACGGCCAA CAACATCACG ATCCGGCACG TCGATCTGCA GGGCAAGGGC AGCGTCAGCA ACCTGGGTGG CTCGGCGTCG AACGACGGTC TGGCGATCTA CGGCGCGTCG GACGTCACCC TGTCCCATTT CCGGATGGTC GGCATCGGCC GCTGCCCGTT CTTCGTCAGC CCGCGCAACC TGGTGGTCGA GCATGGCTGG GTCCAATCCT ATTTCGGCTC GGCCGCCGTG CATTCCGAAG TGGCCAGCAT CTGGGGGTTT GCCGGCGCCG TCGGTGACGT GACCTTCCGC CACAACCTGT TCACCGACAT TCAAAGCACC GGCGGCATCA TGTGGGACAA CTCGTCCAAC AACAGCGCCC GCCTGAATGT CTACGGCAAC GTCTTCTACA AGCCTGCCGG TGCCAGCTGG GGCCGTGCCA ACGGCGTGGT CGGCGGCTGG ACGGGCGGTG GTGGCGAGCA GTTCCGCAAT GCGTCGGTCT ACAACAACTC CTTCATCAAC GTCGACCAGG AAAGCCTGAG CACGCTGCCC AACGTCTATT CCGGCAACGT CGCCCACAAC AACATCTTCT ACAACAGCAG CAGCCCCAAC TTCGCCAAGT TCGGCGCTCA CAACCACAAC CACTTCATCA ATTCCGGCGG CAACCACTCG GAAGCCAACG GCACCAGCGC GGCCAGCGGC GATCCGTTCG TCAATGTCGC CGGACTGGAC TTCCGCCTGA AGGCCGCCAC GGCCGCAGGC CTGACCCTGG CAGCGCCCTT CAACGTGGAT GCGCTGGGCA AGACCCGCGG TGCTGACGGC ACCAGCGATC GCGGCGCCTT CGAGTTCGGT GGGGCGTCAC TGTCGGCTCC GGCCAATCTG CAGGTCCAGT GA
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Protein sequence | MKIFTQLLAL VILFAAQSAI AKNNYVRAGA TGANNGSDWT NAYASLPATL VRGDTYYIAD GSYAGRTFST PVSGTTPIII KKATLADHGI ATGWSDSYGD GQAAFTSGLV FTSSYWTLDG QTGGGAVNSW VQNFGFKITE TRDGNAVIKI GQGVTANNIT IRHVDLQGKG SVSNLGGSAS NDGLAIYGAS DVTLSHFRMV GIGRCPFFVS PRNLVVEHGW VQSYFGSAAV HSEVASIWGF AGAVGDVTFR HNLFTDIQST GGIMWDNSSN NSARLNVYGN VFYKPAGASW GRANGVVGGW TGGGGEQFRN ASVYNNSFIN VDQESLSTLP NVYSGNVAHN NIFYNSSSPN FAKFGAHNHN HFINSGGNHS EANGTSAASG DPFVNVAGLD FRLKAATAAG LTLAAPFNVD ALGKTRGADG TSDRGAFEFG GASLSAPANL QVQ
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