Gene Lcho_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1370 
Symbol 
ID6159988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1452821 
End bp1454125 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content63% 
IMG OID641664124 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_001790403 
Protein GI171058054 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AATTCGATGC AATCGTGGTC GGCGCGGGCC CATCGGGCAA CGCGGCCACC 
TACACGCTGG CGAAAGCCGG ATTGAAGGTG CTGCAGATCG AGCGCGGCGA GTACCCGGGC
TCGAAGAACG TGCAGGGCGC GATCCTCTAC AGCGATGCGC TGGAGAAGAT CATCCCCGAC
TTCCGCGACG ATGCGCCGCT GGAGCGCCAC ATCATCGAGC AGCGCATGTG GCTGCTCGAC
GACAACAGCT TCGTCGGCAC CCACTACCGC AGCGACGACT ACAACAAGCC GCCGTACAAC
CGCTACACCA TCATCCGCGC CCAGTTCGAC AAGTGGTTCA GCTCCAAGGT GCGCGAAGCC
GGCGCGCTGC TGATCTGCGA GACCACCGTC GAGCAGCTGC TGATGGACGA CGACAAGGTG
GTGGGCGTGC GCTGCGACCG CATGGGCGGC GACGTCTTTG CCGACGTGGT GATCCTGGCC
GACGGCGTCA ATTCGACGCT GGCACGCAAG GCCGGTTTCC ACGGCGAGCT GTCGAGCAAG
AACGTCGCGC TGGCGGTCAA GGAAATCCTC TTCATGCCCG AAGAGGTGAT CCAGGCGCGC
TTCAACATCG GTGAAGAAGA GGGCGTGGTG ATCGAGCTGA TGGGCTCGGT GACCGAGGGC
ATGGTCGGGA CCGGTTTCCT CTACACCAAC AAGGATTCGC TCACCATCGG CGTGGGCTGC
ATGTTGAGCG ACTTCAAGAA CAACCCGAAC AAGACCACGC CCTACGCGCT GCTCGAAAAG
CTCAAGGCGC ACCCGTCGGT CGCGCCGCTG ATCGCGGGCG GCGAGATGAA GGAATACTGC
GCGCACCTGA TCCCCGAAGG CGGCTTCAAT GCGGTGCCCA AGATCTTCGG TGACGGCTGG
ATGATCGTGG GCGACTCGGG TGGCTTCGTC AATGCCGCGC ATCGTGAAGG CTCGAACCTG
GCAATGACCA CCGGACGCAT CGCGGCAGAG ACGGTGATTG CCGCCAAGGC CGCCGGCAAG
GCGATGACCG AGAAGACGCT CAAGGCCTAC AAGGACACGC TCGACGAGAG CTTCGTCATG
AAGGACCTGA AGAAGTACCG CCACATGCCC GACGTGCTCG AGAAGAGCCC GCAGTTCTTC
ACAACCTATC CGGGCCTCGT CAACCGCGCT GCCAAGACGA TGTTCACGGT CGACGGCATC
GACAAGATGA CCAAGCAGCG CGAAGTGATG GGCAGCTTCA AGTCCGCCCG CAAGCTCACC
GGCCTGGTGG GCGATGCCAT CAAGATCTGG AGGGCCACGC GATGA
 
Protein sequence
MAEKFDAIVV GAGPSGNAAT YTLAKAGLKV LQIERGEYPG SKNVQGAILY SDALEKIIPD 
FRDDAPLERH IIEQRMWLLD DNSFVGTHYR SDDYNKPPYN RYTIIRAQFD KWFSSKVREA
GALLICETTV EQLLMDDDKV VGVRCDRMGG DVFADVVILA DGVNSTLARK AGFHGELSSK
NVALAVKEIL FMPEEVIQAR FNIGEEEGVV IELMGSVTEG MVGTGFLYTN KDSLTIGVGC
MLSDFKNNPN KTTPYALLEK LKAHPSVAPL IAGGEMKEYC AHLIPEGGFN AVPKIFGDGW
MIVGDSGGFV NAAHREGSNL AMTTGRIAAE TVIAAKAAGK AMTEKTLKAY KDTLDESFVM
KDLKKYRHMP DVLEKSPQFF TTYPGLVNRA AKTMFTVDGI DKMTKQREVM GSFKSARKLT
GLVGDAIKIW RATR