Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1370 |
Symbol | |
ID | 6159988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1452821 |
End bp | 1454125 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641664124 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001790403 |
Protein GI | 171058054 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGA AATTCGATGC AATCGTGGTC GGCGCGGGCC CATCGGGCAA CGCGGCCACC TACACGCTGG CGAAAGCCGG ATTGAAGGTG CTGCAGATCG AGCGCGGCGA GTACCCGGGC TCGAAGAACG TGCAGGGCGC GATCCTCTAC AGCGATGCGC TGGAGAAGAT CATCCCCGAC TTCCGCGACG ATGCGCCGCT GGAGCGCCAC ATCATCGAGC AGCGCATGTG GCTGCTCGAC GACAACAGCT TCGTCGGCAC CCACTACCGC AGCGACGACT ACAACAAGCC GCCGTACAAC CGCTACACCA TCATCCGCGC CCAGTTCGAC AAGTGGTTCA GCTCCAAGGT GCGCGAAGCC GGCGCGCTGC TGATCTGCGA GACCACCGTC GAGCAGCTGC TGATGGACGA CGACAAGGTG GTGGGCGTGC GCTGCGACCG CATGGGCGGC GACGTCTTTG CCGACGTGGT GATCCTGGCC GACGGCGTCA ATTCGACGCT GGCACGCAAG GCCGGTTTCC ACGGCGAGCT GTCGAGCAAG AACGTCGCGC TGGCGGTCAA GGAAATCCTC TTCATGCCCG AAGAGGTGAT CCAGGCGCGC TTCAACATCG GTGAAGAAGA GGGCGTGGTG ATCGAGCTGA TGGGCTCGGT GACCGAGGGC ATGGTCGGGA CCGGTTTCCT CTACACCAAC AAGGATTCGC TCACCATCGG CGTGGGCTGC ATGTTGAGCG ACTTCAAGAA CAACCCGAAC AAGACCACGC CCTACGCGCT GCTCGAAAAG CTCAAGGCGC ACCCGTCGGT CGCGCCGCTG ATCGCGGGCG GCGAGATGAA GGAATACTGC GCGCACCTGA TCCCCGAAGG CGGCTTCAAT GCGGTGCCCA AGATCTTCGG TGACGGCTGG ATGATCGTGG GCGACTCGGG TGGCTTCGTC AATGCCGCGC ATCGTGAAGG CTCGAACCTG GCAATGACCA CCGGACGCAT CGCGGCAGAG ACGGTGATTG CCGCCAAGGC CGCCGGCAAG GCGATGACCG AGAAGACGCT CAAGGCCTAC AAGGACACGC TCGACGAGAG CTTCGTCATG AAGGACCTGA AGAAGTACCG CCACATGCCC GACGTGCTCG AGAAGAGCCC GCAGTTCTTC ACAACCTATC CGGGCCTCGT CAACCGCGCT GCCAAGACGA TGTTCACGGT CGACGGCATC GACAAGATGA CCAAGCAGCG CGAAGTGATG GGCAGCTTCA AGTCCGCCCG CAAGCTCACC GGCCTGGTGG GCGATGCCAT CAAGATCTGG AGGGCCACGC GATGA
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Protein sequence | MAEKFDAIVV GAGPSGNAAT YTLAKAGLKV LQIERGEYPG SKNVQGAILY SDALEKIIPD FRDDAPLERH IIEQRMWLLD DNSFVGTHYR SDDYNKPPYN RYTIIRAQFD KWFSSKVREA GALLICETTV EQLLMDDDKV VGVRCDRMGG DVFADVVILA DGVNSTLARK AGFHGELSSK NVALAVKEIL FMPEEVIQAR FNIGEEEGVV IELMGSVTEG MVGTGFLYTN KDSLTIGVGC MLSDFKNNPN KTTPYALLEK LKAHPSVAPL IAGGEMKEYC AHLIPEGGFN AVPKIFGDGW MIVGDSGGFV NAAHREGSNL AMTTGRIAAE TVIAAKAAGK AMTEKTLKAY KDTLDESFVM KDLKKYRHMP DVLEKSPQFF TTYPGLVNRA AKTMFTVDGI DKMTKQREVM GSFKSARKLT GLVGDAIKIW RATR
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