Gene Lcho_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1369 
Symbol 
ID6159987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1451678 
End bp1452802 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID641664123 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001790402 
Protein GI171058053 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAT CCAACAAGCC TGCGATGGCC AACGCCGCCG CCGCAGGCGC CGCAAAGACA 
GCGGGCCGCA GTGGCCGGAG CACCGAACTG CCCGAGCACC TGAAGGTCTA CAAGGGCGTG
TGGGTGTTCA TCGAACACGA CCGTGGCCAG GTGCACAGCG TGAGCTGGGA GCTGATGGGC
GAGGCCCGCA AGCTGGCCGA CAAGCTGGGC GTGGAGGTGA GCGGCGTGCT GATGGGCGGC
CCGGCCGACA AGCTCGAAGA CTACGCCCGC GAAGCCTATG TCTACGGCGC CGATCACTGC
TACGTCATGC GTGACCCGGC GCTGCAGGGC TATCGCAACG AGCCCTTCAC CAAGGGCCTG
ACCGACCTGG TGAACAAGCA CCAGCCCGAG ATCATGCTGC TGGGCGCCAC CACCATGGGC
CGCGACCTGG CCGGCTCGGT GGCCACCACG CTGGGCACCG GCCTGACGGC CGACTGCACC
GAGCTCAACA TCGACGGCCG GGCTCTGGCC GCCACGCGCC CGACCTTCGG CGGCAGCCTG
CTGTGCACGA TCATGACGCT GGCCTACCGG CCGCAGATGG CCACGATGCG CCCGCGCACC
GCGCCCATGC CCAGGCGCGA CGAGAGCCGC AGCGGCAGCA TCTCCACGAT GGCGCTGGGC
ATGATCGAGA CCGACATCGT CACCAAGCTG CTGGCGTTCA TCCCCGACGC CAACCGCAAC
ACGGTGAACC TGGCCTATGC CGACATCATC ATCACGGCCG GCAAGGGCTT GAAGAACGCC
GACAACTGCC GGCTGGTGTG GGACCTGGCC CGCGTGCTGG GCGCCGAGGT GGGCGCCACT
CGCGCCGTCA CCCAGGCCGG CTGGATGGAC GCCGAGCGCC AGGTAGGCCA GACCGGCAAG
ACCGTGCGGC CCAAGCTCTA CATCGCCGCG GGCGTCAGCG GTGCCATTCA GCACCGCGTG
GGCATGGAGA GCAGCGACAT CATCGTCGCG ATCAACACCG ACCCCCATGC ACCGATCTTC
GACTTCGCTC ACCACGGCAT CGTCGGCAAC GCGATGCAGG TGCTGCCGGT GCTCACCGAG
CAGTTCAGGT CCTACCTGGA CAAGCGCATC CGCAAAGTAG CCTGA
 
Protein sequence
MAESNKPAMA NAAAAGAAKT AGRSGRSTEL PEHLKVYKGV WVFIEHDRGQ VHSVSWELMG 
EARKLADKLG VEVSGVLMGG PADKLEDYAR EAYVYGADHC YVMRDPALQG YRNEPFTKGL
TDLVNKHQPE IMLLGATTMG RDLAGSVATT LGTGLTADCT ELNIDGRALA ATRPTFGGSL
LCTIMTLAYR PQMATMRPRT APMPRRDESR SGSISTMALG MIETDIVTKL LAFIPDANRN
TVNLAYADII ITAGKGLKNA DNCRLVWDLA RVLGAEVGAT RAVTQAGWMD AERQVGQTGK
TVRPKLYIAA GVSGAIQHRV GMESSDIIVA INTDPHAPIF DFAHHGIVGN AMQVLPVLTE
QFRSYLDKRI RKVA