Gene Lcho_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1368 
Symbol 
ID6159774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1450797 
End bp1451648 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID641664122 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001790401 
Protein GI171058052 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG TCGTCTGCAT CAAGCAGGTG CCCGATTCCG CCCAGATCCG CGTGCACCCG 
GTGACCAACA CCATCATGCG CCAGGGCGTG CCGGCGATCG TCAACCCCTA CGACCTGTTC
GCGCTCGAAG AAGCGCTGCG GCTCAAGGAC CAGTTCGGCG GCCGCGTCAC GATGCTGTGC
ATGGGCCCGC CGCAGGCCGA GGACGCTTTG CGCAAGTGCA TCAGCTTCGG CGCCACCGAT
GCCATCCTCG TCACCGACCG TGCCTTCGCC GGTGCCGACA CGCTGGCCAC CTCGTATGCG
CTGGCCGCGG CGATCCGCAA GATCGGCCAG GAGCAGGCGG TCGACCTGAT CTTCACCGGC
AAGCAGACCA TCGACGGCGA CACGGCCCAG GTCGGCCCCG GCGTCGCCAA ACGGCTGGGC
CTGAACCTGC TGACCTACGT CAGCAAGATC AACGAGCTGG ATCTGGACGG CCGCACCATC
ACCGTGGAGC GCCGCGCCGA GGGCGGCGTG CAGCGCCTGA AGACCACGCT GCCCAGCCTG
ATCACGATGC TCGAAGGTAC CAACGAGATG CGCTTCGCCA CCATGGACGA CATGCTGCGC
GCCGCGCGGG TGCCTTGCGC CAAGTGGAAC AAGGACGACG CCGGCATCGA GGACGTCAGC
AAGATCGGCC TGAAGGGCAG CCCCACCATC GTCAGCAAGG TGTTCGCGCC CAAGGCGCGC
AAGGAACGCG CCGACATGCA GGAGGTGGGC GATGGCGCCA GCGTCAACGA CGCGTGCCTG
AACCTGCTGC AGAAGATCTT CACCACCCAC CCGACGCTTG AACAAGAAAC CGTCGAGCGC
CTGAGCGCCT GA
 
Protein sequence
MHIVVCIKQV PDSAQIRVHP VTNTIMRQGV PAIVNPYDLF ALEEALRLKD QFGGRVTMLC 
MGPPQAEDAL RKCISFGATD AILVTDRAFA GADTLATSYA LAAAIRKIGQ EQAVDLIFTG
KQTIDGDTAQ VGPGVAKRLG LNLLTYVSKI NELDLDGRTI TVERRAEGGV QRLKTTLPSL
ITMLEGTNEM RFATMDDMLR AARVPCAKWN KDDAGIEDVS KIGLKGSPTI VSKVFAPKAR
KERADMQEVG DGASVNDACL NLLQKIFTTH PTLEQETVER LSA