| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1360 |
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| Symbol | |
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| ID | 6159959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1444099 |
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| End bp | 1445325 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664114 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_001790393 |
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| Protein GI | 171058044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA AGCAGCCGGA TGCCAAACCG ATCTACCTGG ACTACGCCGC GACCACGCCG
GTCGATCCCC GGGTGGTGCA CGCGATGCTG CCGTTCCTCT ACGAGAACTT CGGCAACCCC
GCCTCGCGCA GCCACGCCTA CGGCTGGGCC GCCGAAGAGG CGGTCGAGAT CGCCCGCGAA
CACGTCGCCC GCCTGATCGG CGCCGACCCG CGCGAGATCG TCTGGACCTC GGGTGCGACC
GAATCGAACA ACCTCGCCAT CAAGGGCGCG GCGCAGTTCT ACGCAGCCAA GGGCCGGCAC
CTGATCACCG TCAAGACCGA GCACAAGGCG GTGCTCGACA CGATGCGTGA ACTCGAGCGC
AGCGGCTTCG AGGTCACCTA CCTCGACGTG ATGGAAGACG GACTGATCGA CCTCGAGGTG
CTGAAGGCGG CGATCCGCCC CGACACCCTC CTGGTCTCGG TCATGTACGT CAACAACGAG
ATCGGCGTGA TCCAGGACAT CCCGGCGATC GGCGCGCTGT GCCGCAATCG GGGCGTCCTG
TTCCATGTGG ATGCGGCGCA GGCCAGCGGC AAGGTGGCGA TCGATCTCGC CACGCTGCCG
ATCGACCTGA TGAGCCTGTC GGCGCACAAG ACCTACGGCC CCAAGGGCGT CGGTGCGCTG
TACGTTCGGC GCAAGCCGCG GGTGCGCATC GAGGCGCAGA TCCACGGTGG CGGCCACGAA
CGCGGCATGC GCTCGGGCAC GCTGCCCACG CACCAGATCG TCGGCATGGG CGAGGCCTAC
CGGCTGGCGC GTGACTTCAT GGGTGCCGAG AACGAACGCA TCCGCGGCCT GCGTGACCGC
CTGCTGGCGG GCCTGCAGGC GATCCCCGAG GTGCGCATCA ACGGCCACCT CGAGCAGCGC
GTGCCGCACA ACCTCAACAT CAGCTTCACC TTCGTCGAAG GCGAGTCGCT GCTGATGGGC
ATGAAGGGCA TCGCGGTGTC GTCCGGCTCG GCCTGCACCA GCGCCAGCCT GGAGCCCAGC
TACGTGCTGC GTGCGCTCGG CCTGTCCGAC GAGGTGGCGC ACAGCTCGGT GCGTTTCTCG
GTCGGCCGCT TCAGCAGCGA GCAGGACATC GACACCGCGA TCGCCAAGGT CAAGCACACC
GTCGAGCGCC TGCGCGACCT GAGCCCGCTG TGGGACATGC ACTGCGCCGG CATCGACATC
CGCACCGTGC AATGGGCTGA ACACTGA
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| Protein sequence | MDLKQPDAKP IYLDYAATTP VDPRVVHAML PFLYENFGNP ASRSHAYGWA AEEAVEIARE
HVARLIGADP REIVWTSGAT ESNNLAIKGA AQFYAAKGRH LITVKTEHKA VLDTMRELER
SGFEVTYLDV MEDGLIDLEV LKAAIRPDTL LVSVMYVNNE IGVIQDIPAI GALCRNRGVL
FHVDAAQASG KVAIDLATLP IDLMSLSAHK TYGPKGVGAL YVRRKPRVRI EAQIHGGGHE
RGMRSGTLPT HQIVGMGEAY RLARDFMGAE NERIRGLRDR LLAGLQAIPE VRINGHLEQR
VPHNLNISFT FVEGESLLMG MKGIAVSSGS ACTSASLEPS YVLRALGLSD EVAHSSVRFS
VGRFSSEQDI DTAIAKVKHT VERLRDLSPL WDMHCAGIDI RTVQWAEH
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