Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1355 |
Symbol | |
ID | 6161330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1440169 |
End bp | 1440843 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641664109 |
Product | NifQ family protein |
Protein accession | YP_001790388 |
Protein GI | 171058039 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGC TGACGCGCAA GGTCATCGGT CTGCGTTTGT CGGTGTCGCC CTCGGGCGTG CACGGCTCGT TGCCGGTGGG CGAGCGGCTG GCTCACTGGT CGGCCCTGAT GGCGTGCGCT GCCGATGTCG ACGCGCCCGA GGTCCAGGCA TTGGCCGGCG TGCTGGCCAC CGCGTTCGCC AGCCACGGCA CGCACCAGCT GCCGCTCGCC GGCCTGGGCG CGGCCGCCAC GCGCCGCCTG CTGGCGCGCT GGTTCCCGGG TGCCGAGCGG GTGCTGGGGC TGGAGTGGCA GGCGCTGGTC CAGGCCGCGG CGCGTGTCGA GCCGCGCTAC GACGAGATCG AGGACCTGGT CGCGCTGCTG ACCGACAGCG CCAGCGCCGC GGCCGGTTCG CGCGACGAGG CGCTCTGGCT GGCTCATGCC GTGAGCCAGG CCACGCTGGC CGACAACCAC CTGTGGCAGG ACCTGCACCT GCCCTCGCGG CGCGAGCTGA GCGCCTTGAT GGCACGCTGG TTTCCGCAGC TCGCCGAGCG CAATCAACGC GACATGAAGT GGAAGAAGTT CCTCTACAAG CAGCTGTGCG ACAAGGCCGA GCTGTCGATC TGCCGCGCGC CCAGTTGCAG CGTGTGCAGC GACTACGCCG TCTGTTTCGG GCCCGAGGAC GCGGTGGCGG CCTGA
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Protein sequence | MNTLTRKVIG LRLSVSPSGV HGSLPVGERL AHWSALMACA ADVDAPEVQA LAGVLATAFA SHGTHQLPLA GLGAAATRRL LARWFPGAER VLGLEWQALV QAAARVEPRY DEIEDLVALL TDSASAAAGS RDEALWLAHA VSQATLADNH LWQDLHLPSR RELSALMARW FPQLAERNQR DMKWKKFLYK QLCDKAELSI CRAPSCSVCS DYAVCFGPED AVAA
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