Gene Lcho_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1347 
Symbol 
ID6161372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1434024 
End bp1434485 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content73% 
IMG OID641664101 
Producthydrogenase maturation protease 
Protein accessionYP_001790380 
Protein GI171058031 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC ACCTGCTCTG CTTCGGCAAC GAGCTGCACG GCGACGACGG CTTCGGCCCG 
GCCGTGGGCC GGCGTCTGCT CGCGCAGCCC TTGCCGCGGC CGTGGGAACT GCATCAGATC 
GGCACGCGCG GGCTCGACGC GCTGTCGCTG CTGCTCGACT GCGAGGCCGC CATCGTCATC 
GACGCCGCCG CGCCGCACGG CCAGCCGGGC CGGCTGCGCG AACTCGATGT GTCGGCGGTG 
GCGACCGAAG CGTCGATCGT CGGCCACGGC ATGGGCCTGG GCTTCGTGCT GCGGGCCTTG 
CAGGCCAGCG GCGAGCCACG GCCCGCGCTG CGCATCCTGA CCGCCGAGAT GGCCGACGTG 
AGCCCGTTCC GCATGAGCCT GTCGCCGGCG GTGGCCGAGG CCGTCGATGC GGCCGTGGTG 
CAGATCCGGC TTTGGATGAG CGACGATGCA GCGCCTTGCT GA
 
Protein sequence
MRRHLLCFGN ELHGDDGFGP AVGRRLLAQP LPRPWELHQI GTRGLDALSL LLDCEAAIVI 
DAAAPHGQPG RLRELDVSAV ATEASIVGHG MGLGFVLRAL QASGEPRPAL RILTAEMADV 
SPFRMSLSPA VAEAVDAAVV QIRLWMSDDA APC