| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1345 |
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| Symbol | |
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| ID | 6161370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1429833 |
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| End bp | 1431284 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664099 |
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| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
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| Protein accession | YP_001790378 |
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| Protein GI | 171058029 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.830922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT CCCTCAAAGC CAAGATCGCC GAAGTGTTCG ACGAGCCCGG TTGCGACAAG
AACCAGGCCA AGAGCGAGAA GGAACGCAAG AAGGGCTGCA CCAAGCAGCT CACGCCCGGC
GCCGCGGCGG GCGGCTGCGC CTTCGACGGC GCCAAGATCG CGCTGCAGCC GATCGTCGAC
GTGGCGCACC TGGTGCACGG CCCGATCGCC TGCGAGGGCA ACAGCTGGGA CAACCGCCAC
AGCGCGTCGT CGGGTGCGAC CACCTACCGC ACCGGCTTCA CCACCGACAT CAACGAACTC
GACGTCATCT ACGGCGCCGA GAAGCGCCTG TTCAAGGCCA TCCGCGAGAT CATCGAGAAG
GTGAATCCGC CGGCGATCTT CGTCTACCAG ACGTGTGTGA CCGGCCTGAT CGGCGACGAC
ATCGAGGCGG TCTGCAAGCG CGCCACCGAG AAGTTCGGCA AGCCGGTGAT CCCCGTCAAC
GCACCCGGTT TCGCCGGCCC GAAGAACCTG GGCAACAAGC TCGGCGCCGA GGCGCTGCTC
GACCACGTGG TCGGCACCAT CGAGCCCGAA GTCACCACGC CGTACGACAT CAACATCATC
GGCGAGTACA ACCTGAGCGG CGAACTCTGG CAGGTCAAGC CGCTGCTCGA CGCCTTGGGC
GTGCGCATCC TCAGCTGCAT CTCGGGCGAT GGCCGCTACG CCGAGGTGGC CTCCGCGCAC
CGTGCCCGCG CCAACATGAT GGTGTGCTCC AAGTCGATGA TCAACATCGC CACCAAGATG
GCGCAGCGCT GGGGCATCCC GTATTTCGAA GGCTCGTTCT ACGGCATCAG CGACATGAGC
ACCACGCTGC GCGAGATCGC CCGGCTGCTG GTTCAGACCG GCGCACCGAG TGATCTGAAG
GACCGCACCG AGGCGCTGAT CGCGGTCGAG GAAGCGCGTG CCTTCGAGCG CATCCGCGCC
TACAAGCAGC GGCTCGCGGG CAAGAAGGTG CTGCTGATCA CCGGCGGCGT CAAGAGCTGG
AGCGTGGTCT CGGCGCTGCA GGAAGCCGGC CTCGAAGTGG TCGGCACCAG CGTCAAGAAA
TCGACCCAGG AAGACAAGCG CAAGCTCAAG GACATCATGG GCGACGATGC CGACGCCCAC
ATGATCGACG ACATGACGCC GCGCCAGATG TACGCGATGC TGCGCGACGC GAAGGCCGAC
ATCATGTTGA GCGGCGGCCG CAGCCAGTTC GTCGCGCTGA AGGCGCGCAT GCCCTGGATG
GACATCAACC AGGAACGCCA CCACGCCTTT GCCGGCTACG AAGGCATGGT GACGATGATC
GCGGAGATCG ACAAGGCGCT CTTCAACCCG ATGTGGGCGC AGGTGCGCAC ACCCGCGCCG
TGGGAGGCGG TCGACCCGCT GCTGGTCGAG CAGGACGCCG CGCAGCTGGC GGCCGAGGCG
GCACCGGCCT GA
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| Protein sequence | MSASLKAKIA EVFDEPGCDK NQAKSEKERK KGCTKQLTPG AAAGGCAFDG AKIALQPIVD
VAHLVHGPIA CEGNSWDNRH SASSGATTYR TGFTTDINEL DVIYGAEKRL FKAIREIIEK
VNPPAIFVYQ TCVTGLIGDD IEAVCKRATE KFGKPVIPVN APGFAGPKNL GNKLGAEALL
DHVVGTIEPE VTTPYDINII GEYNLSGELW QVKPLLDALG VRILSCISGD GRYAEVASAH
RARANMMVCS KSMINIATKM AQRWGIPYFE GSFYGISDMS TTLREIARLL VQTGAPSDLK
DRTEALIAVE EARAFERIRA YKQRLAGKKV LLITGGVKSW SVVSALQEAG LEVVGTSVKK
STQEDKRKLK DIMGDDADAH MIDDMTPRQM YAMLRDAKAD IMLSGGRSQF VALKARMPWM
DINQERHHAF AGYEGMVTMI AEIDKALFNP MWAQVRTPAP WEAVDPLLVE QDAAQLAAEA
APA
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