Gene Lcho_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1344 
Symbol 
ID6161369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1429171 
End bp1429506 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content68% 
IMG OID641664098 
Producthypothetical protein 
Protein accessionYP_001790377 
Protein GI171058028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.933529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC TTGGCGCCAT CATCCGCACC CGCATCGGCA ACGTCGCCGA TGTCGCGCAG 
CAGTTGCAAG GCTGCGCGGG TGTCGATCTG GCGCTGAACC CCGGCGATGG CCGGCTCGTG
ATCGTGCTCG AAGACTGCGA AGTCGACGGC CTCGTCAAGA CCGCTGCCGA ACAGCTGGCG
GCGATCGCGT TGTGGCCCGA CGTGCTCAAC ACATCGCTGG TCTACGAATA CTCCGGCCCC
GATTCGCCCG CGCCCGCAGG GGCAGAAGGC GTCGACTTCA AGGCCTGGCG TCGCAGCCTG
GCCGAGATCG CCGGCCAGCC GGCCGGCCCG ACCTGA
 
Protein sequence
MSILGAIIRT RIGNVADVAQ QLQGCAGVDL ALNPGDGRLV IVLEDCEVDG LVKTAAEQLA 
AIALWPDVLN TSLVYEYSGP DSPAPAGAEG VDFKAWRRSL AEIAGQPAGP T