Gene Lcho_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1341 
Symbol 
ID6160327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1424871 
End bp1425716 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID641664095 
ProductNapH/MauN family ferredoxin-type protein 
Protein accessionYP_001790374 
Protein GI171058025 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02163] ferredoxin-type protein, NapH/MauN family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG GCGAAGCCGT GCGCATGAAG GGCTGGTGGC TGGCGCACCG TTTCCTCCTG 
CTGCGCCGCG CCAGCCAGCT GGGCATCTTC ACGCTGTTCC TGCTCGGTCC GATGGCGGGC
GTGTGGATCG TCAAGGGCAA CCTGGCGTCG AGCCTGACGC TCGACGTGCT GCCGCTCACC
GACCCCTTCG TGCTGGCGCA GGTGCTGGCT ACGCGCCACC TGCCCGAGCT CAGCGCGCTG
ATCGGCGCGG CGATCGTGAT CGCGTTCTAT GCGCTGGTCG GCGGGCGGGT GTTCTGCTCG
TGGGTCTGCC CGGTCAACAT CGTCACCGAC AGCGCCGCGT GGCTGCGCCG GCGCCTGAAC
ATCGGCAGCG GCCGCGCGCC GCGCAACAAC CTGCGCCACT GGCTGCTGGG CGCCGTGCTG
CTGGCCAGCG CGGCGAGCGG CATGGCGGTG TGGGAGACGG TCAACCCGGT CTCGATGACG
CAGCGCGCGC TGATCTTCGG CGGCAGCGTG GCCTGGGGCA TCACCGCGGC GGTGTTCCTG
TTCGACCTGC TGGTGGCGCC GCGCGGCTGG TGCGGCAGCC TCTGCCCGGT CGGCGCCGCC
TACGCGCTGA TCGGCCACAA GAGCGTGGTG CGCGTGAGCG CGCGCCACAG CAGCCGGTGC
AACGACTGCG CCGACTGCTA TGCGGTCTGC CCCGAGCCGC AGGTGATCCC GATCGCCCTC
AAGGGCAAGG GCGGCGCACT CCCGGTGATC GCCGACCCGG CCTGTACCAA CTGTGGCCGC
TGCATCGATG TCTGCGGCCC CGATGTCTTT ACCTTCACCC ACCGACGAGA TACCCGGAGA
GACTGA
 
Protein sequence
MSAGEAVRMK GWWLAHRFLL LRRASQLGIF TLFLLGPMAG VWIVKGNLAS SLTLDVLPLT 
DPFVLAQVLA TRHLPELSAL IGAAIVIAFY ALVGGRVFCS WVCPVNIVTD SAAWLRRRLN
IGSGRAPRNN LRHWLLGAVL LASAASGMAV WETVNPVSMT QRALIFGGSV AWGITAAVFL
FDLLVAPRGW CGSLCPVGAA YALIGHKSVV RVSARHSSRC NDCADCYAVC PEPQVIPIAL
KGKGGALPVI ADPACTNCGR CIDVCGPDVF TFTHRRDTRR D