| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1326 |
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| Symbol | |
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| ID | 6163020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1411588 |
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| End bp | 1412304 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664080 |
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| Product | LrgB family protein |
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| Protein accession | YP_001790359 |
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| Protein GI | 171058010 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.781498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TCGTGCAGCT GTGGGTCTAC CTGTCGTCGA CGCCGCTGTT CGGCCTGACC
GCCACGCTGG TCGCCTACGT CGTGGCCAGC GCGCTGCACG AGCGCCTGGG CCGCCCGCCC
TGGGCCAACC CGGTGCTGTG GTCGGTGATC TGCATCGGCG GCGTGCTGCT GGCCACCGGC
ACGCCGTACC CGACCTACTT TGCCGGCGCG CAGTTCGTGC ACGTGCTGCT CGGCCCGGCG
GTGGTGGCGC TGGCCTGGCC GCTGTGGCAG CGCCGCGTCG AGGTGCGCCG GCGCGGTGTC
GCGCTGACGA TGGCCGCGCT GGTCGGCGGT GTGGCCGCGG GTGGCAGCGC GGTGGCGCTG
GCCTGGGCCT TCGACCTGCC GGTCGAGGTG CTGCGCTCGC TGTCCGCCAA ATCGGTCACC
GCGCCGGTGG CGATGGGCAT CGCCGAGCGG GTCGGCGGCG TGCCGGCGCT GGCGGCGGTG
TTCGCGGTGA TCACCGGGCT GGTGGGCGCG CTGCTGGGTC GCACGGTGTT CGGGCTGCTG
CGCGTCGACG CGTGGGCGGT GCGCGGTTTT GCGCTCGGCA CCACCTCGCA CGGCATCGGC
GCGGCGCGGG CGCTGCAGGT GCATGCCGAC GCCGGTGCCT ATGCCGGCAT CGCGCTGGGC
CTGCAGGTGC TGCTGGCGGC GCTGCTGATC CCGCTGCTGT TTCGCTGGTT CGGCTGA
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| Protein sequence | MTDFVQLWVY LSSTPLFGLT ATLVAYVVAS ALHERLGRPP WANPVLWSVI CIGGVLLATG
TPYPTYFAGA QFVHVLLGPA VVALAWPLWQ RRVEVRRRGV ALTMAALVGG VAAGGSAVAL
AWAFDLPVEV LRSLSAKSVT APVAMGIAER VGGVPALAAV FAVITGLVGA LLGRTVFGLL
RVDAWAVRGF ALGTTSHGIG AARALQVHAD AGAYAGIALG LQVLLAALLI PLLFRWFG
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