| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1300 |
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| Symbol | |
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| ID | 6163952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1386153 |
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| End bp | 1387559 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664054 |
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| Product | histidine kinase |
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| Protein accession | YP_001790334 |
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| Protein GI | 171057985 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0380592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGGG CCGGGGCCGG CCCGGCCTGG GCGGCGATCA CGCTGCTGGC GTGCATCGGG
CTGCTGGTCG CGCAGGCGTG GCCGCTGCGG CTGGCCCTGG CGGCGCTGAT CGTGCTCGCG
GCCACGGTGA TGGCCGTGAC CGTGCGCCGC CAGGCCGAGG CCCTGGCCCA GGCGCTGACG
CTCAAGCGCT GCACCGAGGA TCTGGCCGGC CAGCTGTCGC TCGAGAAGGC CGCCGCCGAC
CAGGCCCGGC GCGTCGCCGA GGCGGCCAAC CGCGCCAAGA CGCAGTTCTT CTCGGCCGCC
AGCCACGATC TGCGCCAGCC GCTGCACGCG CTCGGGCTGT TTGCCGAAAC GCTGCGCCGC
AAGCAGGGCC GGACAGGCGC CGCCGCCGAT GACGACGAGG TGGCGCAGCT GGTGCACGAC
ATCGTCGAGT CGGTCGGCGC GCTCGAGGGG CTGTTCGACG AGCTGCTCGA CCTCACCCAC
ATCGACAGCG GCGGCGTCGA CGTGCGGCCG CGCGCCTGCG CGATGGCCGA GATCTACATG
CGCCTGCGGC TGCACTTCGA GCCGGTGGCG TTCGACAAGG GGCTGACGCT CGATTTCTTC
GGCGGTCACC ACGCGGTGCA GGCCGACCCG GTGCTGGTCG AGCGCATCCT GCGCAACCTG
GTGTCCAACG CGATCCGCTA CACCGAGGAC GGCGGCGTGA TCGTCGGCTG CCGCTCGCGG
GGCGGGCAGC GCCTGGTGCA GGTCTGGGAC AGCGGCATCG GCATCTCGGC CGAGGCGCTG
CCGCGCATCT TCGACGAGTT CTACCAGGTC GGCGGCCGCC GCCCTCTGGA GCCGCATCAC
CGCAAGGGGA TGGGGCTCGG GCTGGCGATC GTCAAGCGCC TGGCCGGCCT GATGGACGCG
CCGCTGACGG TGTGCTCGAA GGTCGAGCGG GGCAGCGTGT TCTCGCTGAC CCTGCCGGCC
GCGGTCGCCG AGCCGATGCC GGGTGCGGTG GTGCTGGCGC ACGAACTGCC GCAGGTGACG
CTGCACGGCC GCCGGGTGGT GGTGGTCGAG GACGACGCCG CCGTGCTGAC GAGCCTGCGC
GGCCTGCTCG AGAGCTGGGG CGCGCAGGTC GTCGCGTTCG ACCGCGCGCA GACGGCCTGC
AGCTGGGCGC AGCAGCACCC CGGTTCGGCG CCCGACCTGC TGATCGTCGA TCACGGCCTG
CCCGAAGGAT GCACCGGCAC CGAGGTGATC GTGGCCCTGC GCGCGGTCTG GGGGCCGGGC
CTGCCGGCGG TCATGGTCAC CGGCCACACG CTGCACGACC ACGAGACCGA AGCGGCTGCC
GGCAACTACC ACGTGCTGTT CAAGCCGCTG GCCCCGAACC GGCTGCGGGC GATGGTCTCG
TTCAAGCTCG GCAGCCGCGC CGCCTGA
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| Protein sequence | MSRAGAGPAW AAITLLACIG LLVAQAWPLR LALAALIVLA ATVMAVTVRR QAEALAQALT
LKRCTEDLAG QLSLEKAAAD QARRVAEAAN RAKTQFFSAA SHDLRQPLHA LGLFAETLRR
KQGRTGAAAD DDEVAQLVHD IVESVGALEG LFDELLDLTH IDSGGVDVRP RACAMAEIYM
RLRLHFEPVA FDKGLTLDFF GGHHAVQADP VLVERILRNL VSNAIRYTED GGVIVGCRSR
GGQRLVQVWD SGIGISAEAL PRIFDEFYQV GGRRPLEPHH RKGMGLGLAI VKRLAGLMDA
PLTVCSKVER GSVFSLTLPA AVAEPMPGAV VLAHELPQVT LHGRRVVVVE DDAAVLTSLR
GLLESWGAQV VAFDRAQTAC SWAQQHPGSA PDLLIVDHGL PEGCTGTEVI VALRAVWGPG
LPAVMVTGHT LHDHETEAAA GNYHVLFKPL APNRLRAMVS FKLGSRAA
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