| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1296 |
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| Symbol | |
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| ID | 6160908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1381964 |
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| End bp | 1383781 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664050 |
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| Product | glutathione-regulated potassium-efflux system protein KefC |
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| Protein accession | YP_001790330 |
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| Protein GI | 171057981 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00893714 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCCG GCAACTGGCT GCTGACCAGC CTGGTCTTCT TCGGCGCCGC GGTGCTGGTG
GTGCCGCTGG CGCGCTGGCT CGGGCTGGGC GCGATCATCG GCTACCTGGT CGCCGGCATC
GCGATCGGGC CGGCCGGGCT GGGCTTCATC AGCGACCCCG ACACCACCTT GCACGTCGCC
GAGTTCGGCG TGGTGCTGAT GCTGTTCATG GTCGGGCTCG AGCTCGAACC GCACCGGCTC
TGGGCCATGC GCCGGCCGAT CTTCGGCTGG GGCAGCGTGC AGGTGCTGGG CTGCGCGGCG
GCGCTGGCCG GCGTGGCGAT GCTCGCTGGC GCGCCCTGGC GCTGGGCGGT GGTGGGCGCG
CTCGGGCTGG CGCTGTCGTC GACCGCGGTG GCCTTGCAGG TGATGGGCGA GCGCAACCTG
CTGCCCACCG CCAGCGGCCA GGCGGGTTTC TCGATCCTGC TGTTCCAGGA CGTCGCCGCG
ATCCCGATCC TGGCGCTGCT GCCGCTGCTG GGCACCGGCC AGGCGGCGGC CGGCAATCCG
TGGCTCGAAG CCGGCAAGGC GCTGGGCGTG ATCGCCGCCA TCGTGCTGGG CGGTCGATTG
CTGCTGCGCC ACGGCCTGCG CTGGGTGGCG ACCAGCCGCA CGCCGGAGGT CTTCACCGCC
GCCGCGCTCG GCCTGGTGGT CGGCATCGCC GCGCTGATGC AGGCGGTCGG GCTGTCGATG
GCGCTGGGTG CGTTTCTCGG CGGCGTGCTG CTGGCCGAGA GCGAATACAA GCGCGAGCTC
GAGACCGACG TCGAGCCCTT CAAGGGCCTG CTGCTCGGCC TGTTCTTCAT GGCAGTGGGC
ATGAGCATCG ACTTCGCCGC GCTGCTGGCG CGGCCGCTGC TCGTGCTGGC GCTGCTGCTG
GGCTTCCTGG CGGTCAAGGT GCTGGTGCTG TCGGCGATCG GCCGGGCGAT GGGCCTGACG
CGCGCCGAGC GGCCGGTCTG GGTGCTGCTG CTGGCGCAGG GCGGCGAGTT CGCGTTCGTG
GTGTTCCAGC AGGCTGCCGA CGCGGGGGTC TTCAGCAACG CGATCGGCTC GGTGCTGGTC
GGCACGGTGG CGCTGTCGAT GCTGATTACG CCGCTGCTGC TGGTGGCCTT CGACCGCTGG
CTGGCGCCGC GCTACGCCGC GATGTCCGAC GGTCCGCACC GCACCGAACA TGCGCTCGAC
GAGCCGCAAG AGGCGCCGAT CATCGTCTGC GGTTACGGCC GCTACGGCCA GATCGTCGGC
CGGCTGCTCT ACGCCAGCGG CCTGAAGGCC ACGCTGCTCG ACCACGACCC CGAGCAGGTC
GAGGTGATGC GGCGCTTCGG TTTCAGCACC TGGTACGGCG ACGCCACCCG GCTCGACCTG
CTGCGCAAGG CCGGCGCCGC GCAGGCACGC GTGATCGTGG TGGCGGTCGA CGACGTCGCG
CAGAGCCTGA AGATCGTCGA CCTGGCTCAG GCGCACTTTC CGCAGGCCCA GTTGGTGGTG
CGGGCGCGCA ACGTGCAGCA CCACTACGCG CTGCGCGAGC GCGGCGTCAC GCACATCGAA
CGCGAGACCT TCGAGTCGGC GCTGGTCAGC GGCCGCAGCG TGCTCGAGGC GATGGGCCAC
GAGCCGCATC ACGCCTGGCA GCTGGCGGCC CGCTTCCGGC GCTTCAACCT GGCGCTGATC
GAGCGCACCT GGCCGCACCG GGCCGATCGC CAGCAGCTGA TGTCGATCGC CAAGCAGGGC
AGCCAGCAGC TCGAGGAGCT GTTCGCGCAG GAGCGCGCCG AGCGCGAACA GCAGCGCCGC
GGCAACTGGC AGGACTGA
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| Protein sequence | MTAGNWLLTS LVFFGAAVLV VPLARWLGLG AIIGYLVAGI AIGPAGLGFI SDPDTTLHVA
EFGVVLMLFM VGLELEPHRL WAMRRPIFGW GSVQVLGCAA ALAGVAMLAG APWRWAVVGA
LGLALSSTAV ALQVMGERNL LPTASGQAGF SILLFQDVAA IPILALLPLL GTGQAAAGNP
WLEAGKALGV IAAIVLGGRL LLRHGLRWVA TSRTPEVFTA AALGLVVGIA ALMQAVGLSM
ALGAFLGGVL LAESEYKREL ETDVEPFKGL LLGLFFMAVG MSIDFAALLA RPLLVLALLL
GFLAVKVLVL SAIGRAMGLT RAERPVWVLL LAQGGEFAFV VFQQAADAGV FSNAIGSVLV
GTVALSMLIT PLLLVAFDRW LAPRYAAMSD GPHRTEHALD EPQEAPIIVC GYGRYGQIVG
RLLYASGLKA TLLDHDPEQV EVMRRFGFST WYGDATRLDL LRKAGAAQAR VIVVAVDDVA
QSLKIVDLAQ AHFPQAQLVV RARNVQHHYA LRERGVTHIE RETFESALVS GRSVLEAMGH
EPHHAWQLAA RFRRFNLALI ERTWPHRADR QQLMSIAKQG SQQLEELFAQ ERAEREQQRR
GNWQD
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